Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181560g00006 ATGGAAGCCAAGCCTCTTGAATCTGTTCCCTCTTCACACAACACCACTCCTGGTTTCTTTTTCTCTTCCTCTCCATTTTTGTTTTCTGTGCTTTTTTTCAAAATTTTTTTCTTTTACTTCTCACTTTTTTTTTGTGGTACTTTTGTTTTTGTTTATTTTTTTTTTCACTTTCTAGGTGGACCCCAGAAGAAGATTGACATGGGACAAAAGATGGAAGGTGGTGATGGTGTTGGAGTGATCAAGGAAAAGAAGAAAAACACAACAAGTTTTGAAATTGGTGCTGGGTTTGGAGGTGCTTCTGCTACAAACACTGAAACACTGAAGACAAAGAAAAAAGAAAAAGAAGAAGAAGAAGAAGGAACTAAAAGAAAACCAGCTTTGAAGAACAAAGCATGCCAACAACAACAAGATAGATGTGGTTTCTTGTTCACAGAAGCTCAAAGGCGTGAGCTTCACCATCAAGTTCTCATCTTTAACCACTTTGCTTCTTATCTCCCTCTCCTTCTCCCTCTACCCTATCATCATCACCTTGTTCCACCCTTTGGTTCTGGATTTGGTGTTTTTCATCATCAATTTCCAATCTATATGGCAGAATACAATAATTACCAATGTTTTGACTATCGAAGCATGATGGATCCCGAACCGAATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGCAGCAAGAACACATTACCTGGTCATAAGTATTGTGAACGACACGTGCACAGAGGTCGGAACCGTTCAAGAAAGCCTGTGGAAGCATCTGATGTTAACTCAGATTCTATAACAAAGCCTTGTAACAAGCTACCTACCACCATAGTCTCAAACACAGAATCTGCTGTTTCAATTCCAACCCCTGGCCCTAAGGTAATAAACTTTGGCAACATGATATCAGTTGTTTCGGATAACAGAAGTAGCCATAATTTAAGCAAGAAGGATAATGAGATCAAGAGCTGTGTCGGCTACAGTATCAGTGTAATTAGCAGTGGCAAAGGAAGTGTTACCTATGATGGTACTAACTGCATCTCTGCTGGTGCTGGTGCTAGCATAGGCTTCTCCCCAAGGAGTGTTCTCCAAGGATTTCAAAAACACTAA 1101 0.3996 MEAKPLESVPSSHNTTPGFFFSSSPFLFSVLFFKIFFFYFSLFFCGTFVFVYFFFHFLGGPQKKIDMGQKMEGGDGVGVIKEKKKNTTSFEIGAGFGGASATNTETLKTKKKEKEEEEEGTKRKPALKNKACQQQQDRCGFLFTEAQRRELHHQVLIFNHFASYLPLLLPLPYHHHLVPPFGSGFGVFHHQFPIYMAEYNNYQCFDYRSMMDPEPNRCRRTDGKKWRCSKNTLPGHKYCERHVHRGRNRSRKPVEASDVNSDSITKPCNKLPTTIVSNTESAVSIPTPGPKVINFGNMISVVSDNRSSHNLSKKDNEIKSCVGYSISVISSGKGSVTYDGTNCISAGAGASIGFSPRSVLQGFQKH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181560g00006 366 Pfam WRC 213 255 IPR014977 -
Stsc181560g00006 366 ProSiteProfiles WRC domain profile. 212 256 IPR014977 -
Stsc181560g00006 366 MobiDBLite consensus disorder prediction 106 126 - -
Stsc181560g00006 366 MobiDBLite consensus disorder prediction 244 263 - -
Stsc181560g00006 366 MobiDBLite consensus disorder prediction 104 129 - -
Stsc181560g00006 366 PANTHER GROWTH-REGULATING FACTOR 5 110 293 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181560g00006 Stsc-Chr181560 23709 26680 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181560g00006 138 255 GRF Transcription Factor Family AT2G36400 47.154 2.31e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181560g00006 - - ahf:112753949 394.43