Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181560g00003 ATGGATGGTATTGGGTGGTATGACATAATAGATATAGGAGTATTGGATGAAGAAACATCTGCATCTACACTTCCATCTGCGTCGTCCTCATCCTTCAATCTTCAATGCTTATATCTGTCAGGATGTGAGAATCTGAAGCAACTTCCAGACACCTTTTATAAGCTCACATCTCTTCAAGAGCTTTGCATTGAATGTTGCAAAGAGTTGGACACATCAAACCTACACATCTTATTTGATAGTTTGTCTTCTTTGAGATACCTAGATATGAGCTGGTGTGATAAGTTGTATGAACTTCCAGATAACATAACCAACTTATCATCGTTGAATTGGTTAGCACTTAATGGAAGTAACCTGACGACCATACCAGAAAGCATCAAACATCTTCCACACCTGAAACACCTCAACTTATGGAATTGCAAAAAACTGGAATCACTAACTCAGATTCCACCATCCCTCCATGAGTTATACTTGGATGATTGCATAATGTTGGAGAGAGTGTTCACTCCAACGCCTCAGCTACTCCAACAACACCTTGCATATTTTCAAAGTTTTCTTCAAGGAATAAGTGACCCTTATAGTATTGCTCCTATATATTTGCGTTTGGCTACTTTTGGTAACAGTGCATTCTTTTCCTTGAACAATTGTCCAAAGTTAAAGAGAGATGCCATTGATGCTATTCAGGAATATTCAGAGCGTTGCAGTAATGGAAGGAGAGAAATGACAGGGGGATTATGGTAA 738 0.3875 MDGIGWYDIIDIGVLDEETSASTLPSASSSSFNLQCLYLSGCENLKQLPDTFYKLTSLQELCIECCKELDTSNLHILFDSLSSLRYLDMSWCDKLYELPDNITNLSSLNWLALNGSNLTTIPESIKHLPHLKHLNLWNCKKLESLTQIPPSLHELYLDDCIMLERVFTPTPQLLQQHLAYFQSFLQGISDPYSIAPIYLRLATFGNSAFFSLNNCPKLKRDAIDAIQEYSERCSNGRREMTGGLW 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181560g00003 245 Gene3D Ribonuclease Inhibitor 17 225 IPR032675 -
Stsc181560g00003 245 Pfam Leucine Rich Repeat 33 55 IPR001611 GO:0005515
Stsc181560g00003 245 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 77 172 - -
Stsc181560g00003 245 SUPERFAMILY RNI-like 20 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181560g00003 Stsc-Chr181560 14826 15563 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181560g00003 29 165 WRKY Transcription Factor Family AT4G12020 34.266 9.13e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181560g00003 - - aip:107627842 193.356