Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181556g00009 ATGGGAGTTGAGAAGCAATTGTTGAGGCCCGGCACCGGTCCCAAGCCTGTTCCCGGTCAGAACGTCACCGTTCACTGCACTGGCTACGGGAAAAATGGTGATCTGTCTCAGAAGTTCTGGAGCACGAAGGATCCAGGGCAGCAACCATTTAGTTTCAAGATAGGGCAGGGGTCTGTTATTAAGGGATGGGATGAAGGTGTTCTTGGCATGCAAGTGGGTGAAGTGGCTCGTCTCCGGTGCTCCCCAGATTATGCATACGGTGCTGGTGGGTTCCCTGCGTGGGGGATACAGCCCAACTCTGTCTTGGACTTCGAAATTGAAGTCCTCAGTGCTCAGTGA 339 0.5369 MGVEKQLLRPGTGPKPVPGQNVTVHCTGYGKNGDLSQKFWSTKDPGQQPFSFKIGQGSVIKGWDEGVLGMQVGEVARLRCSPDYAYGAGGFPAWGIQPNSVLDFEIEVLSAQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181556g00009 112 Gene3D - 1 112 IPR046357 GO:0003755
Stsc181556g00009 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Stsc181556g00009 112 MobiDBLite consensus disorder prediction 1 21 - -
Stsc181556g00009 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 111 - -
Stsc181556g00009 112 SUPERFAMILY FKBP-like 2 110 - -
Stsc181556g00009 112 FunFam Peptidylprolyl isomerase 1 112 - -
Stsc181556g00009 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 14 109 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181556g00009 Stsc-Chr181556 53666 54764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181556g00009 3 110 Calmodulin-binding Proteins AT3G25230 30.631 2.45e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181556g00009 K01802 - qsa:O6P43_012414 231.106