Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181555g00006 ATGAAGAGTGTTCTTGAGTGCTATGATGGTTTCAACAACGTTAACACACTAGTTGATGTTGGTGGTGGTCTTGGTATCAATCTCAAAATGATCACTTCCAAATATCCTCATATCAATGCTATTAACTTTGACTTGCCTCATGTTATTGAACATGCCCCCAACTATGCTGGTGTGAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCCAATGGAGATGCCATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGCATGAAGGTGTTGAAGAATTGCCACAAGGCCATTCCTGGAGATGGAAAAGTGATAGTTGTAGACACAATTGTTCCGGTTTGGCCGGAGAATACAACAGCTGCTAAGGTTGCTTTCAAATCTGACTTATTGATGATGACTCAAAACATTGGAGGAAAAGAGAGATTAAAACATGAGTTCATTCAATTGGCCAATGCTTCTGGATTTTCTGCCATCAAATTTGTGTGCTCTGTTTCTGGATATTGGGTTATGGAGTTCTACAAGTAG 531 0.3974 MKSVLECYDGFNNVNTLVDVGGGLGINLKMITSKYPHINAINFDLPHVIEHAPNYAGVKHVGGDMFESVPNGDAIFMKWILHDWSDEHCMKVLKNCHKAIPGDGKVIVVDTIVPVWPENTTAAKVAFKSDLLMMTQNIGGKERLKHEFIQLANASGFSAIKFVCSVSGYWVMEFYK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181555g00006 176 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 176 IPR016461 GO:0008168
Stsc181555g00006 176 Gene3D Vaccinia Virus protein VP39 1 176 IPR029063 -
Stsc181555g00006 176 Pfam O-methyltransferase domain 1 158 IPR001077 GO:0008171
Stsc181555g00006 176 PANTHER O-METHYLTRANSFERASE 1 174 IPR016461 GO:0008168
Stsc181555g00006 176 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 175 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181555g00006 Stsc-Chr181555 36543 38187 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181555g00006 1 176 Monolignol Biosynthesis Gene Families AT5G54160 57.386 1.72e-72 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181555g00006 K13066 - gmx:100789402 298.13