Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181555g00002 ATGAACACATTTGAGTACACAAGTGTAGATTCAAGATTTAATGATGTTTTCAACAAATCTATGCTAAACCACACAGCCATAGTGATGAAGAGAGTTCTTGAGTGCTATGAAGGTTTCAACAACATTAACACACTAGTTGATGTTGGTGGTGGTCTTGGGATCAATCTCAAATTGATTACTTCCAAATATCCTAATATCAATGCTATTAACTTTGACTTGCCTCATGTGATTGACCATGCCCCCAGCTATGCCGGTGTGAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAATGGAGATGTCATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGAACAATGCATGAAGGTGTTGAAGAATTGCCACAAGGCCATTCCTGAAGATGGAAAAGTGATAGTTGTAGACACAATATTGTTCCGGTTTTGCCGGAGAATACAAAAGCTGCTAAGGTTGCTTTCAAAGCTGACTTAG 480 0.3896 MNTFEYTSVDSRFNDVFNKSMLNHTAIVMKRVLECYEGFNNINTLVDVGGGLGINLKLITSKYPNINAINFDLPHVIDHAPSYAGVKHVGGDMFESVPNGDVIFMKWILHDWSDEQCMKVLKNCHKAIPEDGKVIVVDTILFRFCRRIQKLLRLLSKLT 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181555g00002 159 Gene3D - 2 32 IPR036388 -
Stsc181555g00002 159 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 159 IPR016461 GO:0008168
Stsc181555g00002 159 PANTHER O-METHYLTRANSFERASE 4 141 IPR016461 GO:0008168
Stsc181555g00002 159 Gene3D Vaccinia Virus protein VP39 14 141 IPR029063 -
Stsc181555g00002 159 Pfam O-methyltransferase domain 2 141 IPR001077 GO:0008171
Stsc181555g00002 159 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 143 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181555g00002 Stsc-Chr181555 5397 8034 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181555g00002 1 141 Monolignol Biosynthesis Gene Families AT5G54160 63.830 6.51e-68 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181555g00002 K13066 - gmx:100789402 246.899