Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181541g00010 ATGGAATTTGCTGTTGAAGTTGAAATATTGGCAAGAGTACGGCACAGGAATCTTCTTAGTTTACGTGGTTATTGTGCTGAAGGGCAGGAACGGTTGATAGTATATGATTATATGCCGAATCTGAGCTTGCTCTCTCATCTTCATGGATCACACTCGTCAGAATGCCTTCTTGATTGGAAACGGCGGATGGATATTGCAATTGGATCTGCTGAGGGGATTGTATATCTTCACCACCAAGCAACACCACATATCATCCACAGGGATATCAAAGCAAGCAACGTTCTGCTAGATTCAGATTTCCAGGCCCGAGTTGCTGACTTTGGGTTTGCTAAGTTGATACCTGATGGTGCGACGCATGTGACTACTAAAGTTAAGGGTACCCTCGGATACCTTGCACCAGAATATGCCATGTTAGGCAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGTATTCTCCTTCTAGAACTTGCTAGTGGCAAGAAACCAATCGAAAAGCTTAGTTCGACAGTTAAGCGGCCGATAGTTGATTGGGCACTGCCTTTGGTATGTGACAGGAAATTTAGTGAAATCGCTGATCCACGACTAAACGGTGACTATGTGGAGGAAGAGCTTAAAAGGGTTGTTTTTACTGCGCTGATATGCGCACAAAATCAACCCGAGAAGAGACCTACCATGCTTGATGTCGTTGAACTGTTAAAGGGAGAATCCAAAGACAAATTTTCTCAAATAGAGAATGATGAGTTATTCAAAAGCCCTCCAGCCATAGAAAACAGTGATGGGAAATCTGCAGCTGAAGACGACAGTCCAGACTTAATCGTGGAGGTAAAAGAATCAAAACATGACTTGAAAGATAATACCAGTGTATGA 870 0.4276 MEFAVEVEILARVRHRNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGSHSSECLLDWKRRMDIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPIEKLSSTVKRPIVDWALPLVCDRKFSEIADPRLNGDYVEEELKRVVFTALICAQNQPEKRPTMLDVVELLKGESKDKFSQIENDELFKSPPAIENSDGKSAAEDDSPDLIVEVKESKHDLKDNTSV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181541g00010 289 MobiDBLite consensus disorder prediction 247 289 - -
Stsc181541g00010 289 PANTHER OS01G0253100 PROTEIN 1 240 - -
Stsc181541g00010 289 SUPERFAMILY Protein kinase-like (PK-like) 2 233 IPR011009 -
Stsc181541g00010 289 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181541g00010 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Stsc181541g00010 289 PIRSF ILK 1 246 - -
Stsc181541g00010 289 SMART serkin_6 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181541g00010 289 Pfam Protein tyrosine and serine/threonine kinase 2 233 IPR001245 GO:0004672|GO:0006468
Stsc181541g00010 289 FunFam PTI1-like tyrosine-protein kinase At3g15890 38 249 - -
Stsc181541g00010 289 Gene3D Transferase(Phosphotransferase) domain 1 39 251 - -
Stsc181541g00010 289 MobiDBLite consensus disorder prediction 261 289 - -
Stsc181541g00010 289 Gene3D Phosphorylase Kinase; domain 1 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181541g00010 Stsc-Chr181541 40695 55702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181541g00010 2 236 Trihelix Transcription Factor Family AT1G70460 50.209 4.09e-76 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Stsc181541g00010 PK_Tyr_Ser-Thr 3.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181541g00010 - - cave:132188407 473.011