Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181533g00010 ATGGTTGCCGACGTATCTGATTTTCCGGCGCTTCTTAAGATATCGGCCATAGGGTATAGAGACTTGATGGGTATGAAAATGAAGGAGCAGAGGAAGAAAAAGAAGAAGAATAAGGCGCCGGAGGAGGAAGCTTCGACCGATTCTTGCGAGAATTCTTGTGTGGATTCGGTGGAGGAGGCGGATTCGTCGTCATCTTCTTCGTCACTGTCACCGAGTACGACGGGGGCTGCGGCGGTGTTGAAGGAGTGGAATGGGGTCAGGGAATTGGCCGGAAAAAAAGAACTAGCCGCATCCGGGTTCTTGTGCTGCTTCATGGTTGCCCCCAGATGCATCCAACCTGTTCATGAGGACCATAGTTTTCACACGAAATCAAGCAGGTTATTGAGGAATGGTAACTCAATAGAAGTGATTGCATCTAAGAACATGTCTCAAGGTGATGATGCTACAGAGGAAAACGTGATGGATTGGGTCAAGCATGATAACCGAAGAATGCTTCATGTTGTATATCGTGTTGGGGACTTGGAAAGGACTATAAAATTTTATACAGAGTGCTTGGGGATGAAGGTTCTTAGAATCCGCGACTTGCCGGAGCTTAGATGTGCTAATGCTTTTCTTGGTTATGGACCTGAAGATGAACACTTTGTTATTGAACTGACATACAATTATGGGACTGATGAGTATGACATTGGAAATGGATTTGGCCACTTTGGTGTTTCTTTTGATGATATTTCAAGCATAGTGGACACTGTAAGAGATAATAAGGATGGAAAAATAATTACGGAGCCCAGTCCTGTCAATGGAAGCTGCTCCATAATTGCATTTATTGAAGATCCTGATGGTTATAAATTTGAACTTCTGGAAAGAGTTCCCTCTCATGAACCTTTGTGCCGAGTGATGCTTCGAGTGGGTGATCTTAATCGCTCCATCGAATTTTATGAGAAGGCTTGTGGTATGCAGCTACTTCTTACACGAGATAATCCAGAAAGCCAGTATACCATAGCAATCATGGGTTATGGCCCAGAAGATGAAAATGCTGTTCTGGAGTTGACTTACAATTATGGAGTCACAGAATATGATAAAGGAGATGGCTATGCTCAGATAGCAATAGGCACAGATGATGTGTACAGAACTGCAGAAGCAATCAAACTTGCCGGAGGGAAGATCACCCGCGAACCTGGACCGGTACCTGGCATCGGAACAAAAATAACTGCATGCTTGGACCCTGATGGTTGGAAAACGGTTTTTTTGGATAATGTCGATTTCCTTAGGGAGTTGGAGTAA 1281 0.4418 MVADVSDFPALLKISAIGYRDLMGMKMKEQRKKKKKNKAPEEEASTDSCENSCVDSVEEADSSSSSSSLSPSTTGAAAVLKEWNGVRELAGKKELAASGFLCCFMVAPRCIQPVHEDHSFHTKSSRLLRNGNSIEVIASKNMSQGDDATEENVMDWVKHDNRRMLHVVYRVGDLERTIKFYTECLGMKVLRIRDLPELRCANAFLGYGPEDEHFVIELTYNYGTDEYDIGNGFGHFGVSFDDISSIVDTVRDNKDGKIITEPSPVNGSCSIIAFIEDPDGYKFELLERVPSHEPLCRVMLRVGDLNRSIEFYEKACGMQLLLTRDNPESQYTIAIMGYGPEDENAVLELTYNYGVTEYDKGDGYAQIAIGTDDVYRTAEAIKLAGGKITREPGPVPGIGTKITACLDPDGWKTVFLDNVDFLRELE 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181533g00010 426 ProSitePatterns Glyoxalase I signature 2. 230 242 IPR018146 GO:0004462|GO:0046872
Stsc181533g00010 426 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 162 292 IPR029068 -
Stsc181533g00010 426 Gene3D - 135 289 IPR029068 -
Stsc181533g00010 426 FunFam Lactoylglutathione lyase 291 426 - -
Stsc181533g00010 426 MobiDBLite consensus disorder prediction 46 72 - -
Stsc181533g00010 426 NCBIfam lactoylglutathione lyase 163 288 IPR004361 GO:0004462|GO:0046872
Stsc181533g00010 426 ProSitePatterns Glyoxalase I signature 1. 166 187 IPR018146 GO:0004462|GO:0046872
Stsc181533g00010 426 PANTHER LACTOYLGLUTATHIONE LYASE 148 426 - -
Stsc181533g00010 426 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 163 288 IPR037523 -
Stsc181533g00010 426 MobiDBLite consensus disorder prediction 27 72 - -
Stsc181533g00010 426 Gene3D - 291 426 IPR029068 -
Stsc181533g00010 426 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 294 418 IPR037523 -
Stsc181533g00010 426 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 298 412 IPR004360 -
Stsc181533g00010 426 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 164 285 IPR004360 -
Stsc181533g00010 426 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 295 416 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181533g00010 Stsc-Chr181533 51536 54659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181533g00010 295 415 Calmodulin-binding Proteins AT1G08110 25.850 1.46e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181533g00010 K01759 - gmx:100775714 477.633