Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181531g00011 ATGGAGGGAAGTGACACAAATACCCCTATTTCTTGTTCACAGTCTCCGACATCCTCATGTTCTCTTCCACCACCACCACCTCCGCCGCAAGTGGTGATGAGCCCTTGCGCTGCTTGCAAGATTCTACGGCGGAGGTGTGCGGAGAAATGTGTGTTGGCCCCTTATTTCCCTCCAACTGAACCTGCCAAGTTCACCACCGCTCACAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCGGAGACTCAAAGAGCCGATGCAGTAACAAGCATGGTTTATGAAGCAGGCGCAAGGATAAGAGATCCGGTTTACGGTTGCGCCGGCGCCATTTGCCAGCTTCAGACTCAGGTGAATGAGCTTCAAGCTCAGTTAGCCAAGGCTCAAGCTGAGCTTGTCAACATGCAGCTCCAACAGGCCAATATGGTGGCTCTTCTTTACATGCAAATGGCGGAGACTAAGACTACTACCACCACACAACAACCATCACCGCCACCATCGCCGCAACAATCGGTGGACAACTTCATTGCTAGCCCTCCTCACACCACCTCTTATCATATGAATTACAATAATCTCAATTTCTTTGACGACAACAACACTAGCCTCAACTCAATATGGGAACCTCTTTGGACATGA 645 0.4992 MEGSDTNTPISCSQSPTSSCSLPPPPPPPQVVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPETQRADAVTSMVYEAGARIRDPVYGCAGAICQLQTQVNELQAQLAKAQAELVNMQLQQANMVALLYMQMAETKTTTTTQQPSPPPSPQQSVDNFIASPPHTTSYHMNYNNLNFFDDNNTSLNSIWEPLWT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181531g00011 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 165 - -
Stsc181531g00011 214 MobiDBLite consensus disorder prediction 1 26 - -
Stsc181531g00011 214 Coils Coil 114 141 - -
Stsc181531g00011 214 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
Stsc181531g00011 214 MobiDBLite consensus disorder prediction 1 18 - -
Stsc181531g00011 214 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
Stsc181531g00011 214 MobiDBLite consensus disorder prediction 157 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181531g00011 Stsc-Chr181531 51336 52956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181531g00011 31 214 AS2 family AT2G28500 64.362 1.51e-80 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc181531g00011 LOB 6.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181531g00011 - - gmx:100819336 272.322