Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181531g00002 ATGTCGGTAGTGGACATTCTTTTCCGTGTGGACTCCATATGCAGCAAATACGACAAATACGACCTCGACAAGCAGCGGGAACAGAATGCGTACGGTGACGACGCCTTCGCTAAGCTCTACGCCACCGTTGATTCCACCATCCAAGCCGCCCTCAAGAAATCCGATGCTGCTCTGGCGGAGAACAACAGAGCAGCAGCTGCTGCTCTCAATGCGGAGGTTCGTCGTGCCAAGGGTAGACTCATGGACGAGCTTCCTAAGCTCCGCAAATTGGCAAAGAAGAAGGTGAAAGGTTTGACAGACGAAGATCTGGCGATCCGTGAGGATCTTGTATTGGCATTGCCAGAAAGAATCCAAGCAATACCGGATGGTATTACCACCGTCAATCAACCCGGCGGAGGAGGAGGAGGATGGTCATCTCAGCCTAACATCAAGTTTGAATCTGACATGCATCGCGGCTCTGATTATTTTGAGCAATCTGAAGAATCGAGTCAGTTTAGAAATGAATATGAAATGCGCAGGATCAAACAGGATGAAGGTCTTGATTACATATCAGAGGGATTGGATACTTTGAAAAATCTGGCTCATGACATGAATGAGGAAATGGATAGGCAAGTTCCTCTAATGGACGAAATTGACACAAAGGTCGATAGGGCAACAGCTGATGTGAGAAACACTAACAAAAGATTGAAGCAAAGACTTACTGAGTCAACTGAGGTGATATGA 723 0.4703 MSVVDILFRVDSICSKYDKYDLDKQREQNAYGDDAFAKLYATVDSTIQAALKKSDAALAENNRAAAAALNAEVRRAKGRLMDELPKLRKLAKKKVKGLTDEDLAIREDLVLALPERIQAIPDGITTVNQPGGGGGGWSSQPNIKFESDMHRGSDYFEQSEESSQFRNEYEMRRIKQDEGLDYISEGLDTLKNLAHDMNEEMDRQVPLMDEIDTKVDRATADVRNTNKRLKQRLTESTEVI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181531g00002 240 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Stsc181531g00002 240 PANTHER SYNTAXIN 45 232 IPR045242 -
Stsc181531g00002 240 Coils Coil 208 228 - -
Stsc181531g00002 240 CDD SNARE_Qc 175 231 - -
Stsc181531g00002 240 SMART tSNARE_6 166 232 IPR000727 -
Stsc181531g00002 240 FunFam Putative syntaxin-71-like 170 231 - -
Stsc181531g00002 240 SUPERFAMILY SNARE fusion complex 164 230 - -
Stsc181531g00002 240 Gene3D - 170 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181531g00002 Stsc-Chr181531 6828 7948 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181531g00002 1 230 SNARE and Associated Proteins AT3G09740 64.255 1.15e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181531g00002 K08506 - gmx:100817729 325.094