Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181530g00006 ATGCTTCACGCTCCACAACAATCCACCACGTTTCTCTTCATCTCCTTCTTAGGCTTTCTTATTCTTTCCACAATCAAAATCCCTTCTGCTCGCGGAGAATCTTCCACCTGCTTGACGGTTTACAGAAACGGCGGTGCTCCCGCGGTCTTTAAATCCCCAAAATGCCCCCGATGGAAGCTTCGCGATGCCCAAGGCCACGATTCTGATTACCACCGAAGTCACCGCTCTCCGCCTCACGCGCCGCCGCGTTGCCACACTGACATGCTCCAGGGCAGTCGTTCTTCTCAGGAGGACCGCACTCTCTGCGTCCTCGATCTCCGGATTCCATTCCCCGGTGCGGATGGGATCAGGGAGGTTGTAGTGGGTATCGTGGCAGTTTTTGATGGGCACAATGGTGCTGAAGCGAGTGAGATGGCGTCAAAGCTTCTGATGGAGTATTTTGTATTGCACACCTATTTTTTACTTGATGCAGCTTTTTCCGTTATATCAAAAACAAGGGGAACATTGCATCACCGGAGAGAACACAATCACTTGAACATGATGCGTAGGTGGAAGGAGATTCTAGGTTTGCAGGAGCTGCATTTTGAAAGGTTTCAAAATACATTTTCTGAAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTGTTGAGGGCTATCCATGATATTGATGCAAAATTTTCTGAGGAAGCCTTCAGAAATAGTCTTCATTCAGGGTCTACGGCAACTATTATATTGGTGGCCGATGATAAAATTTTAGTTGCCAATATTGGAGATTCTAAGGCTTTCTTGTGCTCTGAAAACTTTCAATCTCCTAGAGAGGCCAAAGACTTATTACTGAAGCAATATAGGCAGAAAGAGCTTGATGGTTCTGTTACTGTGTGGAATCGTGAAAAGTATAAGTTAGCTTCCTCCCATGGACTGACTCATTTTGCTGTAAAAGAATTGACCAGTGATCATCATCCAGACAGAGATGATGAAAGGATTCGGGTAGAGGCAGCTGGTGGACAAGTTATACATTGGGGGGGAGTGCCTCGTGTAAATGGCCAGCTGGCTATTACACGGGCAATTGGAGATGTATTCTTTAAAAGATATGGCATTATATCTGCACCAGAAGTGACTGATTGGCAACCTCTGACTTCTAATGATAGCTATTTAGTGGCTGCATCTGATGGTGTTCTTGAGAAGATGAGCATGCAGGAAGTCTGTGATTTGTTATGGGAAGTACACTCTTCCTCTACTGATATGGGATCAGAGTGTGCCCCTTCACCTTCATATTCATTAGCTGATTTCATTGTCAACACTGCCTTCAAAAAAGGTAGTAGGGATAATATTGCTGCTGCTGTTGTTCCTCTGGAATCTTCCAAATTTTCTGCAAACTCGCTTATGAGAAGCTATATTGAGAAGAGGGATGCTGATTATCGTCTACTTGCTCTGCAGGAACTTGCTTCAAAAAGTTTAGCTAATGATATCATATCTGATGTAATGCACTTGAGCCATCCTCATGCGGTAGATACCAAGTTTAAGCGTATACTGGTTGAAGTGAAACATGGAGATTTTGGATGTTTTTATTTATCTGAAAATCTGGATGAACTTATGGACTCTAAGCAGCCCACCAAAAGAACTGACTGGGAAGATTATTTATATGAACTACCTCAGCCCTTACCAGATACACATCAACATTCCGTAAGTGGTCCAGTATATTTGTATGATAACCAAAACTTCTGCTTACAACTTGGTCCGACTGTTAATGAATCCAAAGAACAATGCATGAATCCTGAAGCATTTGCAAGTTTTATTGGTCTTCTTGAATCAATTCCTTTACACGATACTGGTTCGCATAATGGATCTTCTGGTTATTCAATGCCTGAATCAAGGTACAAATTAAAGAAGAGTTTTGGTCGTGGATCTTATGGTGAAGTATGGTTAGCTTTACATTGGAATTGTAATCAAGGGATTAATGCTGCAGAAATGAGCAACAATGACAATAATAGAAACGACAGCTCAAACACCAGTGATTGTCAGGGTGCTTCCACTAACTATACACTGTACATTTTGAAACGTATAATGGTAGAGAGAGGGTCTGCTGTTTACTTAAGTGGCCTGAGGGAGAAATATTTTGGAGAAATTTTTTTAAATGCCTCCTCAAGCTTTGAAGATCTGCTATCAGCTGAAAAACCAAACTGTCTCTTGGAAACATCACAATTTGTGTTTGAGAATACATTTTCAAACAAATTTCGGTTGAAAAGTGCTGTATATGAAGAAGGTTTGGACCATATTGCAAGATATGTGGAGTCCTTTGAATCTCGGTCTAATGAAATTTGGCTTGTATTCAGTTTTGAAGGCGTATCATTGTCTAAACTTTTGTATACTGTGGAAGATGATACTGCTGAGAAAGAAAAGACAGAGCAAGTAAAACATGTCCAAATACTCCATCCATCAAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAACCTTATATGGCAGCTGTTAATGGCGCTGAAATCTTGTCATGATCGCAATATTACACACAGGGACATTAAACCTGAAAATATGGTGATATGCTTTGAAGATCAGGAGACTGGAAGATGCTTGAAAGATATACCGACTACTGTAAATAGTTTCTCCACCAAAATGCGTATTATAGACTTTGGAAGTGGAATTGATGAATTCACATTGAAGCATTTATATGGTTCAACTGGGCCTTCTAGAGCTGAACAAACTTATGAGTATACACCTCCTGAAGCTTTGCTAAATGCTACGTGGTATCAAGGGCCAACAAGCTCAACTTTGAAATATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACACCAAATGTTTTCCAGATTGATGCGTTAACACAAACTCTTTTGGACCAGCATCTTGATGGCTGGAATGAGGGTGTGAAGGAGCTGGCTTACAAGCTCAGATCATTCATGGAATTGTGTATCTTAATCCCTGAGATGTCCAGAAGTTCCTCAAAAAGGTATCACGCAGCGAACCAGGCTGGTGTTTCACCTGCATCTTGGAAGTGCTCGGAAGAATTCTTTTCTCATCAAATAAAGAGTCGAGATCCTCTTAAAATAGGGAGGACCGGATAA 3147 0.414 MLHAPQQSTTFLFISFLGFLILSTIKIPSARGESSTCLTVYRNGGAPAVFKSPKCPRWKLRDAQGHDSDYHRSHRSPPHAPPRCHTDMLQGSRSSQEDRTLCVLDLRIPFPGADGIREVVVGIVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDAAFSVISKTRGTLHHRREHNHLNMMRRWKEILGLQELHFERFQNTFSENFDDSFHLEILKEALLRAIHDIDAKFSEEAFRNSLHSGSTATIILVADDKILVANIGDSKAFLCSENFQSPREAKDLLLKQYRQKELDGSVTVWNREKYKLASSHGLTHFAVKELTSDHHPDRDDERIRVEAAGGQVIHWGGVPRVNGQLAITRAIGDVFFKRYGIISAPEVTDWQPLTSNDSYLVAASDGVLEKMSMQEVCDLLWEVHSSSTDMGSECAPSPSYSLADFIVNTAFKKGSRDNIAAAVVPLESSKFSANSLMRSYIEKRDADYRLLALQELASKSLANDIISDVMHLSHPHAVDTKFKRILVEVKHGDFGCFYLSENLDELMDSKQPTKRTDWEDYLYELPQPLPDTHQHSVSGPVYLYDNQNFCLQLGPTVNESKEQCMNPEAFASFIGLLESIPLHDTGSHNGSSGYSMPESRYKLKKSFGRGSYGEVWLALHWNCNQGINAAEMSNNDNNRNDSSNTSDCQGASTNYTLYILKRIMVERGSAVYLSGLREKYFGEIFLNASSSFEDLLSAEKPNCLLETSQFVFENTFSNKFRLKSAVYEEGLDHIARYVESFESRSNEIWLVFSFEGVSLSKLLYTVEDDTAEKEKTEQVKHVQILHPSKWWHWLKTTEEGQEEMRNLIWQLLMALKSCHDRNITHRDIKPENMVICFEDQETGRCLKDIPTTVNSFSTKMRIIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPNVFQIDALTQTLLDQHLDGWNEGVKELAYKLRSFMELCILIPEMSRSSSKRYHAANQAGVSPASWKCSEEFFSHQIKSRDPLKIGRTG 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181530g00006 1048 SUPERFAMILY Protein kinase-like (PK-like) 627 1007 IPR011009 -
Stsc181530g00006 1048 Gene3D - 81 463 IPR036457 -
Stsc181530g00006 1048 Pfam Protein phosphatase 2C 213 448 IPR001932 -
Stsc181530g00006 1048 SMART serkin_6 630 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181530g00006 1048 CDD PP2Cc 84 455 IPR001932 -
Stsc181530g00006 1048 Pfam Protein kinase domain 826 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181530g00006 1048 SUPERFAMILY PP2C-like 86 456 IPR036457 -
Stsc181530g00006 1048 ProSitePatterns Serine/Threonine protein kinases active-site signature. 852 864 IPR008271 GO:0004672|GO:0006468
Stsc181530g00006 1048 MobiDBLite consensus disorder prediction 66 90 - -
Stsc181530g00006 1048 ProSiteProfiles Protein kinase domain profile. 630 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181530g00006 1048 SMART PP2C_4 75 453 IPR001932 -
Stsc181530g00006 1048 ProSiteProfiles PPM-type phosphatase domain profile. 83 455 IPR001932 -
Stsc181530g00006 1048 Gene3D Transferase(Phosphotransferase) domain 1 817 1044 - -
Stsc181530g00006 1048 PANTHER PROTEIN PHOSPHATASE 76 454 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181530g00006 Stsc-Chr181530 17320 30670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181530g00006 694 1045 PP2C-type Phosphatase Gene Family AT3G63340 63.559 2.51e-154 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Stsc181530g00006 Pkinase 4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181530g00006 - - gmx:100781476 1639.4