Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181530g00005 ATGCTTCACGCTCCACAACAATCCACCACGTTTCTCTTCATCTCCTTCTTAGGCTTTCTTATTCTTTCCACAATCAAAATCCCTTCTGCTCGCGGAGAATCTTCCACCTGCTTGACGGTTTACAGAAACGGCGGTGCTCCCGCGGTCTTTAAATCCCCAAAATGCCCCCGATGGAAGCTTCGCGATGCCCAAGGCCACGATTCTGATTACCACCGAAGTCACCGCTCTCCGCCTCACGCGCCGCCGCGTTGCCACACTGACATGCTCCAGGGCAGTCGTTCTTCTCAGGAGGACCGCACTCTCTGCGTCCTCGATCTCCGGATTCCATTCCCCGGTGCGGATGGGATCAGGGAGGTTGTAGTGGGTATCGTGGCAGTTTTTGATGGGCACAATGGTGCTGAAGCGAGTGAGATGGCGTCAAAGCTTCTGATGGAGTATTTTGTATTGCACACCTATTTTTTACTTGATGCAGCTTTTTCCGTTATATCAAAAACAAGGGGAACATTGCATCACCGGAGAGAACACAATCACTTGAACATGATGCGTAGGTGGAAGGAGATTCTAGGTTTGCAGGAGCTGCATTTTGAAAGGTTTCAAAATACATTTTCTGAAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTGTTGAGGGCTATCCATGATATTGATGCAAAATTTTCTGAGGAAGCCTTCAGAAATAGTCTTCATTCAGGGTCTACGGCAACTATTATATTGGTGGCCGATGATAAAATTTTAGTTGCCAATATTGGAGATTCTAAGGCTTTCTTGTGCTCTGAAAACTTTCAATCTCCTAGAGAGGCCAAAGACTTATTACTGAAGCAATATAGGCAGAAAGAGCTTGATGGTTCTGTTACTGTGTGGAATCGTGAAAAGTATAAGTTAGCTTCCTCCCATGGACTGACTCATTTTGCTGTAAAAGAATTGACCAGTGATCATCATCCAGACAGAGATGATGAAAGGATTCGGGTAGAGGCAGCTGGTGGACAAGTTATACATTGGGGGGGAGTGCCTCGTGTAAATGGCCAGCTGGCTATTACACGGGCAATTGGAGATGTATTCTTTAAAAGATATGGCATTATATCTGCACCAGAAGTGACTGATTGGCAACCTCTGACTTCTAATGATAGCTATTTAGTGGCTGCATCTGATGGTGTTCTTGAGAAGATGAGCATGCAGGAAGTCTGTGATTTGTTATGGGAAGTACACTCTTCCTCTACTGATATGGGATCAGAGTGTGCCCCTTCACCTTCATATTCATTAGCTGATTTCATTGTCAACACTGCCTTCAAAAAAGGTAGTAGGGATAATATTGCTGCTGCTGTTGTTCCTCTGGAATCTTCCAAATTTTCTGCAAACTCGCTTATGAGAAGCTATATTGAGAAGAGGGATGCTGATTATCGTCTACTTGCTCTGCAGGAACTTGCTTCAAAAAGTTTAGCTAATGATATCATATCTGATGTAATGCACTTGAGCCATCCTCATGCGGTAGATACCAAGTTTAAGCGTATACTGGTTGAAGTGAAACATGGAGATTTTGGATGTTTTTATTTATCTGAAAATCTGGATGAACTTATGGACTCTAAGCAGCCCACCAAAAGAACTGACTGGGAAGATTATTTATATGAACTACCTCAGCCCTTACCAGATACACATCAACATTCCGTAAGTGGTCCAGTATATTTGTATGATAACCAAAACTTCTGCTTACAACTTGGTCCGACTGTTAATGAATCCAAAGAACAATGCATGAATCCTGAAGCATTTGCAAGTTTTATTGGTCTTCTTGAATCAATTCCTTTACACGATACTGGTTCGCATAATGGATCTTCTGGTTATTCAATGCCTGAATCAAGGTACAAATTAAAGAAGAGTTTTGGTCGTGGATCTTATGGTGAAGTATGGTTAGCTTTACATTGGAATTGTAATCAAGGGATTAATGCTGCAGAAATGAGCAACAATGACAATAATAGAAACGACAGCTCAAACACCAGTGATTGTCAGGGTGCTTCCACTAACTATACACTGTACATTTTGAAACGTATAATGGTAGAGAGAGGGTCTGCTGTTTACTTAAGTGGCCTGAGGGAGAAATATTTTGGAGAAATTTTTTTAAATGCCTCCTCAAGCTTTGAAGATCTGCTATCAGCTGAAAAACCAAACTGTCTCTTGGAAACATCACAATTTGTGTTTGAGAATACATTTTCAAACAAATTTCGGTTGAAAAGTGCTGTATATGAAGAAGGTTTGGACCATATTGCAAGATATGTGGAGTCCTTTGAATCTCGGTCTAATGAAATTTGGCTTGTATTCAGTTTTGAAGGCGTATCATTGTCTAAACTTTTGTATACTGTGGAAGATGATACTGCTGAGAAAGAAAAGACAGAGCAAGTAAAACATGTCCAAATACTCCATCCATCAAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAACCTTATATGGCAGCTGTTAATGGCGCTGAAATCTTGTCATGATCGCAATATTACACACAGGGACATTAAACCTGAAAATATGGTGATATGCTTTGAAGATCAGGAGACTGGAAGATGCTTGAAAGATATACCGACTACTGTAAATAGTTTCTCCACCAAAATGCGTATTATAGACTTTGGAAGTGGAATTGATGAATTCACATTGAAGCATTTATATGGTTCAACTGGGCCTTCTAGAGCTGAACAAACTTATGAGTATACACCTCCTGAAGCTTTGCTAAATGCTACGTGGTATCAAGGGCCAACAAGCTCAACTTTGAAATATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACACCAAATGTTTTCCAGATTGATGCGTTAACACAAACTCTTTTGGACCAGCATCTTGATGGCTGGAATGAGGGTGTGAAGGAGCTGGCTTACAAGCTCAGATCATTCATGGAATTGTGTATCTTAATCCCTGAGATGTCCAGAAGTTCCTCAAAAAGGTATCACGCAGCGAACCAGGCTGGTGTTTCACCTGCATCTTGGAAGTGCTCGGAAGAATTCTTTTCTCATCAAATAAAGAGTCGAGATCCTCTTAAAATAGGTTTTTCAAATGTCTGGGCTTTGCGGTTAGTGCGGGATCTGTTACAGTGGGACCCAGAGGACCGGATAAGCGTTGATGAGGCATTGCAGCATCCCTATTTCCAACCTCCTCCAAGAGGGTGA 3255 0.4172 MLHAPQQSTTFLFISFLGFLILSTIKIPSARGESSTCLTVYRNGGAPAVFKSPKCPRWKLRDAQGHDSDYHRSHRSPPHAPPRCHTDMLQGSRSSQEDRTLCVLDLRIPFPGADGIREVVVGIVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDAAFSVISKTRGTLHHRREHNHLNMMRRWKEILGLQELHFERFQNTFSENFDDSFHLEILKEALLRAIHDIDAKFSEEAFRNSLHSGSTATIILVADDKILVANIGDSKAFLCSENFQSPREAKDLLLKQYRQKELDGSVTVWNREKYKLASSHGLTHFAVKELTSDHHPDRDDERIRVEAAGGQVIHWGGVPRVNGQLAITRAIGDVFFKRYGIISAPEVTDWQPLTSNDSYLVAASDGVLEKMSMQEVCDLLWEVHSSSTDMGSECAPSPSYSLADFIVNTAFKKGSRDNIAAAVVPLESSKFSANSLMRSYIEKRDADYRLLALQELASKSLANDIISDVMHLSHPHAVDTKFKRILVEVKHGDFGCFYLSENLDELMDSKQPTKRTDWEDYLYELPQPLPDTHQHSVSGPVYLYDNQNFCLQLGPTVNESKEQCMNPEAFASFIGLLESIPLHDTGSHNGSSGYSMPESRYKLKKSFGRGSYGEVWLALHWNCNQGINAAEMSNNDNNRNDSSNTSDCQGASTNYTLYILKRIMVERGSAVYLSGLREKYFGEIFLNASSSFEDLLSAEKPNCLLETSQFVFENTFSNKFRLKSAVYEEGLDHIARYVESFESRSNEIWLVFSFEGVSLSKLLYTVEDDTAEKEKTEQVKHVQILHPSKWWHWLKTTEEGQEEMRNLIWQLLMALKSCHDRNITHRDIKPENMVICFEDQETGRCLKDIPTTVNSFSTKMRIIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPNVFQIDALTQTLLDQHLDGWNEGVKELAYKLRSFMELCILIPEMSRSSSKRYHAANQAGVSPASWKCSEEFFSHQIKSRDPLKIGFSNVWALRLVRDLLQWDPEDRISVDEALQHPYFQPPPRG 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181530g00005 1084 FunFam uncharacterized protein LOC106771884 isoform X8 818 1079 - -
Stsc181530g00005 1084 ProSiteProfiles Protein kinase domain profile. 630 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181530g00005 1084 SMART serkin_6 630 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181530g00005 1084 Gene3D - 81 463 IPR036457 -
Stsc181530g00005 1084 CDD PP2Cc 84 455 IPR001932 -
Stsc181530g00005 1084 ProSitePatterns Serine/Threonine protein kinases active-site signature. 852 864 IPR008271 GO:0004672|GO:0006468
Stsc181530g00005 1084 SUPERFAMILY Protein kinase-like (PK-like) 627 1080 IPR011009 -
Stsc181530g00005 1084 MobiDBLite consensus disorder prediction 66 90 - -
Stsc181530g00005 1084 Pfam Protein kinase domain 826 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181530g00005 1084 SMART PP2C_4 75 453 IPR001932 -
Stsc181530g00005 1084 SUPERFAMILY PP2C-like 86 456 IPR036457 -
Stsc181530g00005 1084 ProSiteProfiles PPM-type phosphatase domain profile. 83 455 IPR001932 -
Stsc181530g00005 1084 Gene3D Transferase(Phosphotransferase) domain 1 817 1079 - -
Stsc181530g00005 1084 PANTHER PROTEIN PHOSPHATASE 76 454 IPR015655 GO:0004722|GO:0006470
Stsc181530g00005 1084 Pfam Protein phosphatase 2C 213 448 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181530g00005 Stsc-Chr181530 17202 30670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181530g00005 694 1082 PP2C-type Phosphatase Gene Family AT3G63340 65.729 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Stsc181530g00005 Pkinase 7.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181530g00005 - - gmx:100781476 1709.12