Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181529g00006 ATGTCGCTCAAGAGGCGCCCCGAAGACGGCAAGCACAAATCCGATACTTCCACTCCCGACGACAAGCGTCCGAGACCTCCACCCTTTGCCAATGTGGTGCGCGAGATGATGAAGATACAGTCTGTCAAGCATTTGCTGGAGCCAATTCTAGAGCCCTTGATTCGTCGAGTGGTTAAGGAGGAAGTAGAATTGGCCTTAAGGAAGCATTTAACCAGCTTGAAACAGACTGGTGGAAAGGAGATGCATACTTCTGAATTGAGAAGCATGCAGTTGCAGTTTGAAAACAACATTTCTCTTCCAGTGTTCACCGGAGCTCGGATTGAAGGAGAGGATGGCTCCAACTTAAGAGTAGTATTAGTTGATGTATCGACAGGGAAGGTTGTTAGTTCAGGACCTGAATCCTTAGCTAAGGTGGAAATTGTGGTCCTTGAGGGTGATTTTGAAGATGAAAGTGAAATTTGGATGCCTGAAGAGTTTAAGAGCAACATTGTGAGGGAGAGAGAAGGGAAAAAGCCCCTCCTTACTGGAGATGTAGCTGTATATCTTAAAGATGGGACTGTGTACAAGAAGCACCACCCTCCTAATCTGTTTGATGAAGTTTGGAGACTGGAGAAGATAGGCAAGGATGGAGCTTTCCACAAACGTCTAAGTCGGGAAAAGATCTACAGTGTGAAAGATTTTCTTACACTTCTCAATTTGGATCCTGCAAAGCTACGCAGTATACTGGGCACAGGCATGTCTGCAAAGATGTGGGAAATAACCGTGGAGCATGCCCGAACTTGTACAATTGATACGACGAGACATGTTTATTTCCCTCCCCCTTCCCAACAGAAAGCTGGTGTAGTGTTCAATGCTGTGGGGCAAGTGACGGGACTACTCTCTGAATGCGAGTATGTTCCGGTACATAAGCTGTCGGAAACCGAAAAGGCTGATGCTCAAGAATTAGTCATTTCTGCAATCAAACAAGGCGAGAAATTTTCCTCTTATGAAGATGAAGCCTCTCTTTTGGAGGGTTCTTCACATCTAACCAATGTTCTTTACTCCTCGAACTCACCGAATACCGAGGGATCCAGCGCCAACAAGCTTTTGGCTCCTCAAAAGACTGAAGGTCCCACTTATACACCAGCAAGTGCCTCTTCTCCTGATATTATGTCATCCATTTATTCTGTTGGAGGAACCAGTGCCTTGGATGACTTCTGCATGCCTAACTTCGACAGCATGAGCTTTGGTTTTCCGGTACAGGTTGCCAACACTCTGATCTGCGACCCAGATCCAATGGCCCATGCATTTGGAGACGAAGACCATCTGCGCTTTTTCGATACCGATCAAGATTTGCAGAGCGCTGTCGATAGCTTCATGCTGACGCGCTCATCCATTGCCATTGGTAAAGCTCAGAGGAGATGGAGAAAGGTAACCAACGTCCTAAAATGGTTCATGGTGAGGAAACGAAAAAGCGAAAGATACTAA 1467 0.4615 MSLKRRPEDGKHKSDTSTPDDKRPRPPPFANVVREMMKIQSVKHLLEPILEPLIRRVVKEEVELALRKHLTSLKQTGGKEMHTSELRSMQLQFENNISLPVFTGARIEGEDGSNLRVVLVDVSTGKVVSSGPESLAKVEIVVLEGDFEDESEIWMPEEFKSNIVREREGKKPLLTGDVAVYLKDGTVYKKHHPPNLFDEVWRLEKIGKDGAFHKRLSREKIYSVKDFLTLLNLDPAKLRSILGTGMSAKMWEITVEHARTCTIDTTRHVYFPPPSQQKAGVVFNAVGQVTGLLSECEYVPVHKLSETEKADAQELVISAIKQGEKFSSYEDEASLLEGSSHLTNVLYSSNSPNTEGSSANKLLAPQKTEGPTYTPASASSPDIMSSIYSVGGTSALDDFCMPNFDSMSFGFPVQVANTLICDPDPMAHAFGDEDHLRFFDTDQDLQSAVDSFMLTRSSIAIGKAQRRWRKVTNVLKWFMVRKRKSERY 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181529g00006 488 MobiDBLite consensus disorder prediction 1 29 - -
Stsc181529g00006 488 Pfam Calmodulin binding protein-like N-terminal domain 89 188 IPR046831 -
Stsc181529g00006 488 Pfam Calmodulin binding protein C-terminal domain 268 326 IPR046829 -
Stsc181529g00006 488 MobiDBLite consensus disorder prediction 1 22 - -
Stsc181529g00006 488 Pfam Calmodulin binding protein central domain 196 261 IPR046830 -
Stsc181529g00006 488 PANTHER OS02G0177800 PROTEIN 186 364 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181529g00006 Stsc-Chr181529 32404 36437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181529g00006 1 310 Calmodulin-binding Proteins AT5G62570 51.524 9.72e-121 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181529g00006 - - gmx:100793156 731.48