Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181526g00006 ATGGGGGAGGGAAGAGGGAGTAGAGCAATGATTGGTGTAATGGTAATGCTGTGGGTGTGGATGCTTGAATCTCAGATGAGGAGTTTCAGTAATGCACTCACATACAAGGTTGGGGATTCACGTGGTTGGTCCTTCAACGTTACTGACTGGCCTCGTGGAAAGACTTTCATGGCTGGTGATGTACTTGAATTCACTTATGCGTTTGGGATGCACAACGTGATGCAAGTAGAAAAGTTTTTTTACGATCAATGCATTCCTATTCCAAAAATTGGACGTGGAATCGGAGACAATGTGCACTGGTCAGGAAATGATCAAATCCAGCTTCCCTCAGGACAGAGCTACTTCATTTGTGGTTATCTTGGTCATTGTCAGGCTGGCATGAAAATTGCCGTCAATGCTATCTAG 405 0.4469 MGEGRGSRAMIGVMVMLWVWMLESQMRSFSNALTYKVGDSRGWSFNVTDWPRGKTFMAGDVLEFTYAFGMHNVMQVEKFFYDQCIPIPKIGRGIGDNVHWSGNDQIQLPSGQSYFICGYLGHCQAGMKIAVNAI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181526g00006 134 CDD Plantacyanin 33 133 IPR041844 -
Stsc181526g00006 134 ProSiteProfiles Phytocyanin domain profile. 33 134 IPR003245 GO:0009055
Stsc181526g00006 134 Gene3D - 33 133 IPR008972 -
Stsc181526g00006 134 SUPERFAMILY Cupredoxins 34 133 IPR008972 -
Stsc181526g00006 134 Pfam Plastocyanin-like domain 46 127 IPR003245 GO:0009055
Stsc181526g00006 134 FunFam basic blue protein-like 33 133 - -
Stsc181526g00006 134 PANTHER BLUE COPPER PROTEIN 33 132 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181526g00006 Stsc-Chr181526 11926 12434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181526g00006 1 134 Phytocyanin Superfamily AT1G17800 32.867 1.43e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181526g00006 - - ahf:112714333 199.904