Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181525g00006 ATGGATTTAATAATCATAATCATCTCTCTCACTGTCTTACTCTCTTTTCTTTTCTTTCGTTACTCAAAACTTAGCAACATCAAAGAACCTCCCATGGTGCCAGGATCATGGCCAATACTTGGTCACCTTCTGCTCTTCCATGGTTCACAGCCACTCCACATAACTTTAGGAGCCATGGCCGACAAATACGGCCCCCTTTTCACCATCAAGCTTGGTTCCACAAAGATCGCAGTTCTAAGCAACTCGGAAATGGCCAGAGAATGCTTCACCAAGAATGACAAAGCTTCTTCGTCTCGCCCCAAGCTCGTCGCCATTGAACACCTATCTTACAACCAAGCCATGTTCGGCTTCGCGTCATACGGTCCGTATTGGCGCGAAGTTCGCAAGATTGTGACCTTAGAACTTCTCTCAAATCGACGCATGGAGCTTCTTCATGACGTTCGCGTCTCAGAAGTTCAAGCGTCAACGAAGGAGCTCGTGAATCTTTGGTCCAGTCAGAAGGACGAGTCTTCTGGGTATGTGTTGGTGGACATAAAGCAATGGTTCGCAGAATTGACGTTCAACATGGTTTTCAGAATGATTGCAGGGAAGAGATTCTTTGGCGCAATGAAGACGGAGAGTGAGGAAAAGGCAGAAAGGTGTGTGAAATGTGTTAAGAATATGTTGCGGTTGCTGGGAGTGTTCACTGTTGGAGATGCCATTCCTTCTTTAAGATGGTTGGATTTTGGGGGTCATGAGAAGGCCATGAAAGAAGTTGCTATGGAATTGGATAAGATTTTAACAGAATGGATAGATGAGCATCGCCAAATGATGGATTTGGGAGAAAAGGATGCCAATGAACGAGACTTCATCGATGTCATGCTTTCAGTGATTTCTGATGCAAAGATCGATAATGTTGATGCTGATACAATAATAAAAGCTACAATCTTGAATATGATTATAGGATCATCTGAAACAACTACAATTTCCATGACATGGGCAATGTGTCTGCTCTTGAAAAATCCTCGTACATTGGAAAAAGCAAAAGAAGAGCTTGACAAAGAAATAGGGAAAGAGAGATGTGCAAGTGAATCAGATATAAATAAATTAATATATCTTCAAGCTATAATCAAGGAGACGTTAAGATTGTATGCACCCGCTCCTCTTACGGCAACTCATGAATTCTCAGGAAACTGCAATTTAGGTGGATACAACATCAAAAAGGGAACTCAGCTAATTGCAAATCTTTGGAAAATCAACAACGACCCTTGTTTATGGTCAAATCACTTAGAGTTCACACCAGAAAAATTTCTCACAACACATACAGATGTGGATGTTAGGGGACATCATTTTGAGTTGTTACCTTTTGGAAGTGGTAGAAGAGTTTGTCCTGGAATTTCCTTTGGTCTTCAAATGATTCACTTTAGTTTGGCTAGCTTTCTGCATTCCTTTGAAGTATCAATTCCACCTGATGAACCTATTGATATGAGTGGAACTCCTGGATTGGTCCATGCTAAAGCTACCCCATTAACGATTATGGTTAAACCACGTTTATCTCTCAGCTGTTATGAAACTAGGTAG 1560 0.4147 MDLIIIIISLTVLLSFLFFRYSKLSNIKEPPMVPGSWPILGHLLLFHGSQPLHITLGAMADKYGPLFTIKLGSTKIAVLSNSEMARECFTKNDKASSSRPKLVAIEHLSYNQAMFGFASYGPYWREVRKIVTLELLSNRRMELLHDVRVSEVQASTKELVNLWSSQKDESSGYVLVDIKQWFAELTFNMVFRMIAGKRFFGAMKTESEEKAERCVKCVKNMLRLLGVFTVGDAIPSLRWLDFGGHEKAMKEVAMELDKILTEWIDEHRQMMDLGEKDANERDFIDVMLSVISDAKIDNVDADTIIKATILNMIIGSSETTTISMTWAMCLLLKNPRTLEKAKEELDKEIGKERCASESDINKLIYLQAIIKETLRLYAPAPLTATHEFSGNCNLGGYNIKKGTQLIANLWKINNDPCLWSNHLEFTPEKFLTTHTDVDVRGHHFELLPFGSGRRVCPGISFGLQMIHFSLASFLHSFEVSIPPDEPIDMSGTPGLVHAKATPLTIMVKPRLSLSCYETR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181525g00006 519 CDD CYP82 64 510 - -
Stsc181525g00006 519 FunFam Cytochrome P450 82C4 20 508 - -
Stsc181525g00006 519 SUPERFAMILY Cytochrome P450 34 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Stsc181525g00006 519 Pfam Cytochrome P450 31 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PANTHER CYTOCHROME P450 82C3-RELATED 8 516 - -
Stsc181525g00006 519 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00006 519 Gene3D Cytochrome P450 21 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181525g00006 Stsc-Chr181525 25238 28196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181525g00006 3 516 Cytochrome P450 AT4G31970 46.923 1.43e-172 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181525g00006 - - aip:107643961 674.47