Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181525g00005 ATGGTGCCAGGATCATGGCCAATACTTGGTCACCTTCTGCTCTTCCATGGTTCACAGCCACTCCACATAACTTTAGGAGCCATGGCCGACAAATACGGCCCCCTTTTCACCATCAAGCTTGGTTCCACAAAGATCGCAGTTCTAAGCAACTCGGAAATGGCCAGAGAATGCTTCACCAAGAATGACAAAGCTTCTTCGTCTCGCCCCAAGCTCGTCGCCATTGAACACCTATCTTACAACCAAGCCATGTTCGGCTTCGCGTCATACGGTCCGTATTGGCGCGAAGTTCGCAAGATTGTGACCTTAGAACTTCTCTCAAATCGACGCATGGAGCTTCTTCATGACGTTCGCGTCTCAGAAGTTCAAGCGTCAACGAAGGAGCTCGTGAATCTTTGGTCCAGTCAGAAGGACGAGTCTTCTGGGTATGTGTTGGTGGACATAAAGCAATGGTTCGCAGAATTGACGTTCAACATGGTTTTCAGAATGATTGCAGGGAAGAGATTCTTTGGCGCAATGAAGACGGAGAGTGAGGAAAAGGCAGAAAGGTGTGTGAAATGTGTTAAGAATATGTTGCGGTTGCTGGGAGTGTTCACTGTTGGAGATGCCATTCCTTCTTTAAGATGGTTGGATTTTGGGGGTCATGAGAAGGCCATGAAAGAAGTTGCTATGGAATTGGATAAGATTTTAACAGAATGGATAGATGAGCATCGCCAAATGATGGATTTGGGAGAAAAGGATGCCAATGAACGAGACTTCATCGATGTCATGCTTTCAGTGATTTCTGATGCAAAGATCGATAATGTTGATGCTGATACAATAATAAAAGCTACAATCTTGAATATGATTATAGGATCATCTGAAACAACTACAATTTCCATGACATGGGCAATGTGTCTGCTCTTGAAAAATCCTCGTACATTGGAAAAAGCAAAAGAAGAGCTTGACAAAGAAATAGGGAAAGAGAGATGTGCAAGTGAATCAGATATAAATAAATTAATATATCTTCAAGCTATAATCAAGGAGACGTTAAGATTGTATGCACCCGCTCCTCTTACGGCAACTCATGAATTCTCAGGAAACTGCAATTTAGGTGGATACAACATCAAAAAGGGAACTCAGCTAATTGCAAATCTTTGGAAAATCAACAACGACCCTTGTTTATGGTCAAATCACTTAGAGTTCACACCAGAAAAATTTCTCACAACACATACAGATGTGGATGTTAGGGGACATCATTTTGAGTTGTTACCTTTTGGAAGTGGTAGAAGAGTTTGTCCTGGAATTTCCTTTGGTCTTCAAATGATTCACTTTAGTTTGGCTAGCTTTCTGCATTCCTTTGAAGTATCAATTCCACCTGATGAACCTATTGATATGAGTGGAACTCCTGGATTGGTCCATGCTAAAGCTACCCCATTAACGATTATGGTTAAACCACGTTTATCTCTCAGCTGTTATGAAACTAGATTTTTGTTCAATTTCGACAGAAAATGTTGA 1494 0.4163 MVPGSWPILGHLLLFHGSQPLHITLGAMADKYGPLFTIKLGSTKIAVLSNSEMARECFTKNDKASSSRPKLVAIEHLSYNQAMFGFASYGPYWREVRKIVTLELLSNRRMELLHDVRVSEVQASTKELVNLWSSQKDESSGYVLVDIKQWFAELTFNMVFRMIAGKRFFGAMKTESEEKAERCVKCVKNMLRLLGVFTVGDAIPSLRWLDFGGHEKAMKEVAMELDKILTEWIDEHRQMMDLGEKDANERDFIDVMLSVISDAKIDNVDADTIIKATILNMIIGSSETTTISMTWAMCLLLKNPRTLEKAKEELDKEIGKERCASESDINKLIYLQAIIKETLRLYAPAPLTATHEFSGNCNLGGYNIKKGTQLIANLWKINNDPCLWSNHLEFTPEKFLTTHTDVDVRGHHFELLPFGSGRRVCPGISFGLQMIHFSLASFLHSFEVSIPPDEPIDMSGTPGLVHAKATPLTIMVKPRLSLSCYETRFLFNFDRKC 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181525g00005 497 FunFam Cytochrome P450 82C4 1 477 - -
Stsc181525g00005 497 Pfam Cytochrome P450 3 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 SUPERFAMILY Cytochrome P450 3 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS E-class P450 group I signature 53 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS E-class P450 group I signature 154 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 PANTHER CYTOCHROME P450 82C3-RELATED 3 485 - -
Stsc181525g00005 497 Gene3D Cytochrome P450 1 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181525g00005 497 CDD CYP82 33 479 - -
Stsc181525g00005 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181525g00005 Stsc-Chr181525 24970 28144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181525g00005 4 485 Cytochrome P450 AT4G31970 48.770 6.14e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181525g00005 - - adu:107490967 660.988