Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181519g00004 ATGAGCAATACTGAAACCTTGAACAAATCTAATCTTGCAGATAGCAGCAAACGAAATTTCATCGAAAGCGAAATAGAAAGACTTGGAAAAGGAAATATAACCTCTCATATTTTTACATATTCCGAGCTATGCTTCGCAACCCGGAACTTTCACCCTGATTACATGATTGGTGAAGGTGGCTTTGGAAGAGTATACAAAGGATTCCTTAGAGGAACAGATCAGGCTGTTGCTGTGAAGCAACTTAACAGGAATGGATTTCAAGGAAACAGAGAATTTCTTGTGGAGGTTTTGCTCTTGAGCCTGTTGCATAATCCTTATCTTGTGAATTTGGTAGGGTATTGTGCTGATGGAGATCAAAGGGTCCTTGTGTATGAGTATATGGTTAATGGTTCTTTAGAAGATCATCTTTTTGATCTACCTCCAGGGAAAAAGGCTTTGGATTGGAGCACAAGAATGAAGATTGCAGAAGGTGCTGCTAGAGGACTTGAATACTTACACGAAGCATCAAACCCGCCGGTGATATATCGCGATTTCAAGGCATCAAACATACTTTTGGATGAGGATTTCAATCCAAAGTTATCCGATTTTGGACTAGCAAAGCTCGGCCCGACCGGCGATAAGACTCATGTGTCGACAAGGGTGATGGGAACTTATGGTTATTGTGCTCCTGAGTATGCCTCCACAGGGCAATTGACGACGAAATCTGATGTGTATAGTTTTGGCGTCGTGCTTTTGGAGATGATCACAGGGAGAAGAGTCATTGATCATTTGAGACCATCTGGGGAGCAAAACTTAATTTGTTGGGCACAACCACTACTCAAAGACAGAAGGAAGTTTACACTAATGGCTGATCCATTGCTGGAAGGGAGATACCCAATAAGGGGTCTATACCAAGCAATAGCAATAGCAGCAATGTGTCTTCAGGAGGATGCTGAATTAAGGCCTTTGATTAGTGATGTAGTTACAGCTCTTAATGTATTAGCAAAGAAGAATGTAGAAGTGTGTGAAAGGCCACAACAAGAAGCATTAGAGAGTAATGTGAGGACTGAAAATAATAAGAATAATAATTCAGTTGAGATTTGA 1083 0.409 MSNTETLNKSNLADSSKRNFIESEIERLGKGNITSHIFTYSELCFATRNFHPDYMIGEGGFGRVYKGFLRGTDQAVAVKQLNRNGFQGNREFLVEVLLLSLLHNPYLVNLVGYCADGDQRVLVYEYMVNGSLEDHLFDLPPGKKALDWSTRMKIAEGAARGLEYLHEASNPPVIYRDFKASNILLDEDFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVLLEMITGRRVIDHLRPSGEQNLICWAQPLLKDRRKFTLMADPLLEGRYPIRGLYQAIAIAAMCLQEDAELRPLISDVVTALNVLAKKNVEVCERPQQEALESNVRTENNKNNNSVEI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181519g00004 360 CDD STKc_IRAK 56 325 - -
Stsc181519g00004 360 SUPERFAMILY Protein kinase-like (PK-like) 36 333 IPR011009 -
Stsc181519g00004 360 Gene3D Transferase(Phosphotransferase) domain 1 127 354 - -
Stsc181519g00004 360 FunFam Serine/threonine-protein kinase PBS1 127 343 - -
Stsc181519g00004 360 FunFam Serine/threonine-protein kinase CDL1-like 21 126 - -
Stsc181519g00004 360 Pfam Protein kinase domain 54 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181519g00004 360 ProSiteProfiles Protein kinase domain profile. 50 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181519g00004 360 PANTHER OS07G0668900 PROTEIN 22 335 - -
Stsc181519g00004 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Stsc181519g00004 360 Gene3D Phosphorylase Kinase; domain 1 35 126 - -
Stsc181519g00004 360 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181519g00004 Stsc-Chr181519 22992 24494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181519g00004 3 328 Glycoside Hydrolase AT3G07070 65.951 4.57e-156 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Stsc181519g00004 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181519g00004 - - gmx:100798032 523.857