Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181519g00001 ATGAGTGTTCTCCTTGCTACTATCCTCTTACTAATCCCAGTTCTTCTTCTTTTGATTAGAAGAAGAAGAACACCCCAAAGGGTTCCACCTGGTTCACTTGGAATACCAATCATTGGTCAAAGCCTTAGCCTTCTCAGAGCTATGCGTGCAAACAGTGCAGAGAAGTGGATTGAACAACGGATCAGAAAGTATGGTCCTGTTTCAAAGCTAAACTTGTTTGGAAAACCAACTGTTTTGATCCATGGACAAGCTGCAAACAAGTTCATATTCTCTGGCAATGGAGGAACAATTGCTAACCAGCAAACACAGTCTGTTAAGATGATCTTGGGAGACCGGAACGTGCTCGAACTCAGCGGCGAAGATCATAAGCGAGTCAGAAGCGCTCTCATGTCGTTCCTCAAGCCCGAATCATTGAAGCTGTATGTGGGGAAGATTGATGAGGAAGTTAGGAGGCATCTTGAGAGGCATTGGAATGGAAAACAGCAAGTTAAGGTGTTACCTCTGATGAAGACACTCACATTCAACATAATTACTTCTCTTTTGTTTGGTCTTGAGAGTGGAAAGCAAAGAGATCAGTTCCTAGGTTCATTCCAGAGAATGATTGAAGGAATGTGGTCAATTCCTATTAACTTGCCGTTCACACAATACAATCGAAGCCTCAGAGCAAGTGCAAGGATCCAGAAGATGTTGAAGCAGATTGTGAACAGAAAAAGGGTTGAACTTGAGAGAAATGAAGCATCTACTCACCAAGATTTGATCACTTGCTTGCTTGGCATAAAAGGTGATGGTGATGAACAAGTCATCACTGAGAAGGAAATCATTCACAATAGTATGCTTGTCATGGTTGCTGGATATGACACTTCATCTGTTCTAATCACTTTCATTATCAGACTCTTAGCTAATGAACCTGCAATTCTTGCAGCAGTTCTTCAAGAGCAAGAAGAGATAGCAAAAAGCAAGAAATCAGCAGAATCTCTAACTTGGGAAGACCTTTCAAAAATGAAGTACACATGGAGAGTAGCATTGGAAACTCTTAGGGTGTTTCCTCCTATCTTTGGTGGCTTCAGAAAGGCAGTGACAGATATTGAATATGATGGATACATTATTCCCAAAGGGTGGCAGATCTTCTGGGTTACATCAATTACTCAAATGGACAATAGCATATTCCCAGAGCCATCAAAGTTTGATCCAAGTAGATTTGAAGACCAATCATCTACTCCACCATACTGCTTCATTCCATTTGGAGCTGGATCAAGAATATGTCCAGGATATGAGTTGGCCAAGATTGAAACTCTTGTTTCAATCCATTATCTGGTGACAAGATTCAGTTGGAAACTATGTGCAGACAATAACTTCAAGAGGGATCCAATGCCGGTTCCAACTCAAGGGCTTCCAATTGAGATTTGGCCAAGGAAAAATCTTTCCTAA 1428 0.4132 MSVLLATILLLIPVLLLLIRRRRTPQRVPPGSLGIPIIGQSLSLLRAMRANSAEKWIEQRIRKYGPVSKLNLFGKPTVLIHGQAANKFIFSGNGGTIANQQTQSVKMILGDRNVLELSGEDHKRVRSALMSFLKPESLKLYVGKIDEEVRRHLERHWNGKQQVKVLPLMKTLTFNIITSLLFGLESGKQRDQFLGSFQRMIEGMWSIPINLPFTQYNRSLRASARIQKMLKQIVNRKRVELERNEASTHQDLITCLLGIKGDGDEQVITEKEIIHNSMLVMVAGYDTSSVLITFIIRLLANEPAILAAVLQEQEEIAKSKKSAESLTWEDLSKMKYTWRVALETLRVFPPIFGGFRKAVTDIEYDGYIIPKGWQIFWVTSITQMDNSIFPEPSKFDPSRFEDQSSTPPYCFIPFGAGSRICPGYELAKIETLVSIHYLVTRFSWKLCADNNFKRDPMPVPTQGLPIEIWPRKNLS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181519g00001 475 CDD CYP90-like 60 470 - -
Stsc181519g00001 475 SUPERFAMILY Cytochrome P450 20 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PANTHER CYTOCHROME P450 26 26 459 - -
Stsc181519g00001 475 Gene3D Cytochrome P450 20 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 Pfam Cytochrome P450 29 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181519g00001 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Stsc181519g00001 475 FunFam Taxadiene 5-alpha hydroxylase 19 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181519g00001 Stsc-Chr181519 933 3634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181519g00001 6 451 Cytochrome P450 AT5G45340 32.287 2.74e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181519g00001 - - gmx:100790001 746.117