Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181516g00003 ATGGCGAGTAACGAGAACAACGAAAAGAGGAACAACAGGAAGAGCAGCCATGAGAAAGAGAAGGAGTTTGAGGAGGAGCTTGTGTTCGATCAGAACGAAGAAGAAGCTGAACCTCAGGACATTGAAGCTGTCAAGTACGAGAGCGAAAGCAGCAGTAGCAGTGACAGTGGCGGTGATGACGATGATGGTGAAGGTGAAGGGAATCATCATCGCAAAGCACATCATCAACCTGAATCATTCACTTCTCAGCAGTGGCCTCAAAGTTACAAAGAGACTACAGATTCTTATACCATTGCTGCAGCACCCAATTTCGAATCATTTCTACGAGGGCCGAGTTTTCTCTATTCGAGTTTTGTGAATCGTTCGAAGAGCAGCTTGGACATTGACGGAAAGAGTACTCCTTTTCTCTCAGGTCATGAAGGCATTCAAAGAAGATCATCAACGTGGTGGGAGAAAGCTTCGATTCAAAGGCATGTTACTGGAGAATTTCCCATTGATTATGGATGCAGCTTAGCTCAAACAATTTTCAATGGGATTAATGTTATGTGTGGAGTTGGTCTTCTATCCACACCATATACTGTGAGACAAGCAGGGTGGGCTAGTATGGTGGTGATGCTTCTTTTTGCCGTTATATGCTGTTATACGGCCACCCTTTTGAGACGCTGCTTCGAAAGCAAAGAAGGAATCATTACCTACCCGGATATAGGAGAAGCTGCATTTGGAAAATATGGCCGTATTGCTGTATCAATCGTTTTGTACACTGAATTATATTCATACTGTGTGGAATTCATTATCTTGGAAGGAGACAATCTTACTAGTCTGTTCCCGGGAACTTCCTTAGATTGGGGAGGTCTCAAGTTAGACTCCGTGCACTTGTTCGGAATTCTGAGTGCACTTCTTATTCTTCCTACAGTTTGGTTAAAGGATCTTCGCTTAATCTCTTATCTATCAGCTGGAGGAGTTGTTGCAACAATATTGATTGTAATCTGTGTGTTTTGTGTTGGGACAATCGATAACGTTGGCTTCCATCACACCGGTGAAGTGGTGAGATGGAGCGGCCTTCCATTCGCCATTGGTATCTATGGCTTTTGCTTTGCAGGACACTCGGTTTTTCCGAATATTTACCAGTCCATGGCAGACAAATCACAATACCCCAAGGCATTAACAACTTGTTTTATTTTGTGCGTTTTGCTATATGGAGGCGTTGCAGTCATGGGATACCTCATGTTTGGTGACAGCATTTTGTCCCAGATAACATTGAATATGCCAAAGGGTGCATTTGCTTCCAAAGTTGCATCTTGGACAACAATCTGCACTGGTTGCATCTACCGTTTGTGCTGCTTTTCTGATTCCATTTTTTGGGCTTGTGATGTCTTTGATTGGTTCTCTCTTCAGCATACTTGTGTCAGTAATAATGCCAAGTCTCTGCTTTCTGAAAATTGTGGGCAAGAAAGCTACAAAGATACAGGTTGCATTGAGCATCATAATTGCTGGAGCAGGAATCATTTGTGGAATCCTTGGAACATATTCCTCTCTGCTAGATATAGCGAATAG 1554 0.4299 MASNENNEKRNNRKSSHEKEKEFEEELVFDQNEEEAEPQDIEAVKYESESSSSSDSGGDDDDGEGEGNHHRKAHHQPESFTSQQWPQSYKETTDSYTIAAAPNFESFLRGPSFLYSSFVNRSKSSLDIDGKSTPFLSGHEGIQRRSSTWWEKASIQRHVTGEFPIDYGCSLAQTIFNGINVMCGVGLLSTPYTVRQAGWASMVVMLLFAVICCYTATLLRRCFESKEGIITYPDIGEAAFGKYGRIAVSIVLYTELYSYCVEFIILEGDNLTSLFPGTSLDWGGLKLDSVHLFGILSALLILPTVWLKDLRLISYLSAGGVVATILIVICVFCVGTIDNVGFHHTGEVVRWSGLPFAIGIYGFCFAGHSVFPNIYQSMADKSQYPKALTTCFILCVLLYGGVAVMGYLMFGDSILSQITLNMPKGAFASKVASWTTICTGCIYRLCCFSDSIFWACDVFDWFSLQHTCVSNNAKSLLSENCGQESYKDTGCIEHHNCWSRNHLWNPWNIFLSARYSE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181516g00003 517 PANTHER OS05G0424000 PROTEIN-RELATED 177 440 - -
Stsc181516g00003 517 MobiDBLite consensus disorder prediction 7 26 - -
Stsc181516g00003 517 MobiDBLite consensus disorder prediction 63 77 - -
Stsc181516g00003 517 Gene3D Amino acid/polyamine transporter I 168 459 - -
Stsc181516g00003 517 Coils Coil 6 26 - -
Stsc181516g00003 517 Pfam Transmembrane amino acid transporter protein 170 433 IPR013057 -
Stsc181516g00003 517 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181516g00003 Stsc-Chr181516 8041 14288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181516g00003 45 439 Amino Acid or Auxin Permease AAAP Family AT2G41190 63.500 3.71e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181516g00003 K15015 - gmx:100816431 643.269