Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181514g00004 ATGCCCATGGACACTCTGGTCCTCCTTCAGGCACAGCCCTTTGCCGCCTCCCTTGCGGTGGCTGTTGTCTCGCTTCTCCTCTTCCTTTACCTACTCAACCGTAAGGGCACCCCCGCAGCCGCTTCACTTGTGGTTGGTCTTGCCTCTTCACTTCCTAAAGTAACAGTGGTTCCGGGTTTACCAGTCGTTGGGAATCTATTACAATTGAAGGATAAGAAGCCCTATAAGACATTCACACAGTTTGCCCAGAAATATGGTCCCATATACTCTATCAGGGCCGGTGCTTCCTCCATTATTGTTCTCAACTCTGCCCCTCTTGCCAAGGAGGCCATGGTTACCAGATATTCATCGATTTCATCAAGGAAGCTGTCAAATGCATTGACAATTTTGACTTCCAATAAATGTATGGTTGCTATAAGTGACTACAATGACTTTCACAAAATGGTCAAAAAACTTATTCTTGCAAATGTTCTCGGACCCAATGCACAGAAGCGACATCGTCTACATAGAGAAGAAATGGTGGAAAACATGTCGCGCCAGTTTAGTGAACATGTGAAGACCTCCTCTGATTCCCCCATTAATTTTAGGGATGTATTTTCTTCTCAACTTTTTGGATTGGCAATGAAGCAAGGTGTAGGAAGCGATGTGGAATCCGTTTATGTGGATGAATTTGGAAGTAGAATATCAAGGAAGGACATATATCAAATTCTGGTGGTGGACATAATGGAGGGTGCAATTGAGGTGGATTGGCGAGATTTCTTTCCATACTTGAGATGGATTCCAAATAAGAGCATGGAGACAAAAATTCAGAGTATGTGCTTCCGTAGGAAGGCAGTTATGAAAGCCTTGATCAATGAGCAGAAGAAGAGAATTGCTTCCGGAAAGAAAGTGAATTGTTACATTGACCACCTGTTATCGGAAGCCAAAGATCTAACCGAAGATCAAATCCTCATGCTTCTATGGGAGACCATCATAGAGACTTCGGATACTACATTAGTTACTTCGGAGTGGGCTATGTATGAACTTGCTAAAGACAAAATACGCCAGGATCGACTGTATGCAGAGCTCCAAAATGTTTGTGGGAGTGAAAGGGTGACAGAAGACCATTTGCCTAAGCTTCCTTATTTAGGGGCTGTATTCCATGAAACTTTGAGGAAGCACAGTCCAGCTCCAATTGTCCCACTAAGGCATGTTGATGAGGATACGGAAATAGGAGGATATCAGATTCCCGCTGGAAGTGAGATTGCTATAAACATATATGGGTGCAACATGGACAATGAGACATGGGAAAATCCCGAGCAGTGGATGCCGGAGAGGTTTCTAGACGATGAGCAGTATGAGACGATGGATCTGTACAAGACAATGGCATTTGGGGCGGGGAAGAGGGTGTGCGCAGGGGCTCTGCAGGCACAGCTGATAGCATGCTCGTCAATTGGGAGACTGGTTCAGGAATTCGAATGGGAGCTGGCTCAAGGTGAGGAGGAGAATGTTGACACAGTTGGCCTTACCACCCACAGGTTGAATCCCCTCCTTGTCAAAATCAAGCCAAGAAGCAAATGA 1560 0.4526 MPMDTLVLLQAQPFAASLAVAVVSLLLFLYLLNRKGTPAAASLVVGLASSLPKVTVVPGLPVVGNLLQLKDKKPYKTFTQFAQKYGPIYSIRAGASSIIVLNSAPLAKEAMVTRYSSISSRKLSNALTILTSNKCMVAISDYNDFHKMVKKLILANVLGPNAQKRHRLHREEMVENMSRQFSEHVKTSSDSPINFRDVFSSQLFGLAMKQGVGSDVESVYVDEFGSRISRKDIYQILVVDIMEGAIEVDWRDFFPYLRWIPNKSMETKIQSMCFRRKAVMKALINEQKKRIASGKKVNCYIDHLLSEAKDLTEDQILMLLWETIIETSDTTLVTSEWAMYELAKDKIRQDRLYAELQNVCGSERVTEDHLPKLPYLGAVFHETLRKHSPAPIVPLRHVDEDTEIGGYQIPAGSEIAINIYGCNMDNETWENPEQWMPERFLDDEQYETMDLYKTMAFGAGKRVCAGALQAQLIACSSIGRLVQEFEWELAQGEEENVDTVGLTTHRLNPLLVKIKPRSK 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181514g00004 519 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 Pfam Cytochrome P450 58 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Stsc181514g00004 519 Gene3D Cytochrome P450 50 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 CDD CYP77_89 84 510 - -
Stsc181514g00004 519 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181514g00004 519 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 43 517 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Stsc181514g00004 519 FunFam Ent-kaurene oxidase 2 47 519 - -
Stsc181514g00004 519 SUPERFAMILY Cytochrome P450 51 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181514g00004 Stsc-Chr181514 31661 34577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181514g00004 49 517 Cytochrome P450 AT5G25900 63.753 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181514g00004 K04122 - gmx:100802970 747.658