Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181507g00002 ATGAAGAGTGTCAAGTTTAGGGTAGAGGAGTTGTTGAGGATCAACACTACTAGGGTGTTGTTGTACCAAGGTCAATATGATTTGGCTGCTGGTCCAGTGCAAGTTGAGGCATGGGTGAAGACAATGAAATGGGAAGGGATTGAGGATTATCTGAATGCAGAGAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGTTATGTCCAACAATGGAAGTCACTCACCAATGTTGTTGTGTTAGGAGGTGGACATCTTATGCCTGCTGACCAGCCTCTTAGTGTTCAGGCAATGATTCAAGATTGGGTGTTGCAAAGGGCCCCATTTAGTCTCATAACATTCTCCATAAGAACAAATATGCCAACTTTGTTAGAATCCGAGGCAATGAAAAAAGTCCAAGCAGAATTGGATAACACTATTCATTTGGGAGGATGCATTGGAATTCAGGCCAGAAAGGTTCCTAAGAAAGGGTGA 471 0.4331 MKSVKFRVEELLRINTTRVLLYQGQYDLAAGPVQVEAWVKTMKWEGIEDYLNAERKIWKVNGELAGYVQQWKSLTNVVVLGGGHLMPADQPLSVQAMIQDWVLQRAPFSLITFSIRTNMPTLLESEAMKKVQAELDNTIHLGGCIGIQARKVPKKG 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181507g00002 156 Gene3D alpha/beta hydrolase 1 107 IPR029058 -
Stsc181507g00002 156 Pfam Serine carboxypeptidase 2 103 IPR001563 GO:0004185|GO:0006508
Stsc181507g00002 156 SUPERFAMILY alpha/beta-Hydrolases 2 102 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181507g00002 Stsc-Chr181507 863 1458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181507g00002 14 102 Calmodulin-binding Proteins AT2G22960 28.889 7.18e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181507g00002 K09645 - vum:124829110 167.162