Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181506g00001 ATGGGAGACGTGGCGAAGGACCTCACAGCGGGGACCGTGGGAGGGGCGGCGCAGCTGATATGCGGCCACCCTTTCGACACCATCAAGGTGAAGCTGCAGAGCCAGCCAGCACCAGCCCCAGGTCAGGCTCCAAAGTATTCAGGTGCAATTGATGCTGTGAAGAAGACATTAGCAGCTGAAGGTCCTAGGGGCTTGTACAAAGGCATGGGAGCCCCACTTGCTACGGTTGCAGCCTTCAATGCTGTCCTTTTTACAGTTAGGGGACAGATGGAAACATTGGTCAGGACTCAACCTGGTGTCCCTCTCACGGTTAGTCAGCAATTCGTCTGCGGAGCCGGCGCCGGCGTCGCCGTTTCCTTCCTTGCTTGCCCCACTGAACTTGTCAAATGCAGGTTACAAGCACAAAGTGCACTTGCTGGCACCGGAACAGGAACAGGAACAGCAGCAGCAGTGGCTGCTGTGAAGTATGGAGGACCAATGGATGTGGCCAGGCAAGTTCTAAGATCAGAAGGCGGCATGAGAGGCCTTTTCAAGGGCTTGATTCCGACCATGGGCCGCGAGATTCCGGGAAACGCCATAATGTTTGGTGTCTATGAAGCCATCAAGCAGATGCTTGCAGGGGGCCCTGACACTTCAGGGCTAGGCAGAGGCTCTCTCATCCTCGCCGGCGGCTTGGCCGGAGCTTCCTTTTGGTTCATCGTTTACCCGACCGATGTTGTTAAGAGTGTCATCCAAGTAGATGATTACAAGAAGCCTAAGTTTTCTGGCTCCCTTGATGCTTTTAGAAAGATTCAAGCTTCTGAGGGTTTCAAAGGCCTTTATAAGGGTTTCGGTCCGGCGATGGCGCGAAGCGTTCCGGCGAATGCCGCGTGCTTCTTGGCTTATGAGATGACAAGATCAGCTCTGGGCTGA 912 0.5461 MGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPAPAPGQAPKYSGAIDAVKKTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMETLVRTQPGVPLTVSQQFVCGAGAGVAVSFLACPTELVKCRLQAQSALAGTGTGTGTAAAVAAVKYGGPMDVARQVLRSEGGMRGLFKGLIPTMGREIPGNAIMFGVYEAIKQMLAGGPDTSGLGRGSLILAGGLAGASFWFIVYPTDVVKSVIQVDDYKKPKFSGSLDAFRKIQASEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181506g00001 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 204 IPR018108 -
Stsc181506g00001 303 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 302 - -
Stsc181506g00001 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 302 - -
Stsc181506g00001 303 Gene3D Mitochondrial carrier domain 2 96 IPR023395 -
Stsc181506g00001 303 Gene3D Mitochondrial carrier domain 97 302 IPR023395 -
Stsc181506g00001 303 Pfam Mitochondrial carrier protein 102 206 IPR018108 -
Stsc181506g00001 303 Pfam Mitochondrial carrier protein 220 302 IPR018108 -
Stsc181506g00001 303 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Stsc181506g00001 303 SUPERFAMILY Mitochondrial carrier 3 296 IPR023395 -
Stsc181506g00001 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Stsc181506g00001 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 301 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181506g00001 Stsc-Chr181506 10719 12213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181506g00001 22 302 Antiporters AT1G79900 32.517 1.33e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181506g00001 K15109 - ini:109158481 506.523