Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181499g00001 ATGGCAGCATCATTGCTTCTGCTTCTGCTACTCAATTTGAATCTCATCAACATTGGAATTTGCCAAGATGATCATGTTCATTGTCCAGTCCGACTATACTGTACAAAAAACAAAACCAACATTCTTGAGCTACCCGGAGTTTCATCCTCAGTAAAATTCCCAGTCCGTCACATTCATTTCAAATCAAATACTCTAGAAGTGTATGCTGCCGGAATCTGTTTATCAGAACTCTTTCTCAGACTCAATTATTCATCATTCTTTCCTTTCAAATTCATTCGAAGAGATTTAGTTTACTCTGCCCCAGGCTATGATGATCAAAACTACCCACTCAAACCCACCAACATCACTTTTTTCCGTTGTCCTTCAAATAGTAACTACACAACGTTACCTTGCCGGATTCAAGCAGCTGACGATCACGACGGTGTCGTCAGCTCGAATCTCGTACGCTGCACAAAACTGTCTCAACAGATTTTGCCAATACCAGCTGAATTTATAAGGGATTTTTCATTCTACTTGGTGTGGTCCAAAGCAAATTTCCACGGTGAATGCTTCATTGGTTGCAACAAACACAAGAGAATTCAATTCTATGAAATTCTTTTACCCGTTATAGGTGCAACTTTCCTTGTGGCAATACTGGGTGCCTTGTATCATATATATGCCTATTACAGAAACAAAGGAGAAGATCAACGAAGAGTTGAAACTTTTTTGAAGGACTATGAGGCATTGAACCCAACAAGATTCTCTTATGCTGATATCAAGAGAATCACACAGCAATTCAAGGACAAGTTAGGTGAAGGAGCCCATGGAGCTGTCTACAAAGGTAAATTGTCCAATCATATTCTTGTTGCTGTCAAGATTCTCAATACTACTGAAGGAGACGGCAAAGAGTTCATAAATGAAGTTGGAACTATGGCTAAAATCCACCATGTCAATGTGGTTCGCTTGCTTGGCTATTCTGCTGACGGATCTCACCGTGCTTTAGTTTATCACTTCTTCCCCAAAGGTAATCTCCAGAGCTTCATTGCTCCGAGTGACAATGAAAGCTTCCTCGGATGGAACAAGTTGCATCAGATTGCTCTGGGCATAGCCAAAGGAATTGAATATCTTCACCAGGGTTGTGATCAAAGAATTCTGCATTTCGATATTAATCCTCGTAATGTCTTGTTAGATGAAAGTCTCACTCCAAAAATTTCAGACTTCGGTTTGGCTAAGTTATGCTCCAAGAATCAAAGTACAGTGTCCATGACTGCAGCCAGAGGAACTTTAGGGTACATGGCACCGGAAGTTTTTTCTAGAAACTTCGGCAATGTATCTTACAAATCTGATATCTACAGCTATGGAATGTTACTGCTCGAGATGGTTGGAGGAAGAAAAAACACAAATGAGAATCAAGTAAATTTTCAAGTTCTGTATCCAGATTGGATACACAGTTTGCTCGAAGGAGATGACACATATATTCCAATTGAGGATGATGGAGATTTTAGAAAT 1488 0.3985 MAASLLLLLLLNLNLINIGICQDDHVHCPVRLYCTKNKTNILELPGVSSSVKFPVRHIHFKSNTLEVYAAGICLSELFLRLNYSSFFPFKFIRRDLVYSAPGYDDQNYPLKPTNITFFRCPSNSNYTTLPCRIQAADDHDGVVSSNLVRCTKLSQQILPIPAEFIRDFSFYLVWSKANFHGECFIGCNKHKRIQFYEILLPVIGATFLVAILGALYHIYAYYRNKGEDQRRVETFLKDYEALNPTRFSYADIKRITQQFKDKLGEGAHGAVYKGKLSNHILVAVKILNTTEGDGKEFINEVGTMAKIHHVNVVRLLGYSADGSHRALVYHFFPKGNLQSFIAPSDNESFLGWNKLHQIALGIAKGIEYLHQGCDQRILHFDINPRNVLLDESLTPKISDFGLAKLCSKNQSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNENQVNFQVLYPDWIHSLLEGDDTYIPIEDDGDFRN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181499g00001 496 ProSiteProfiles Protein kinase domain profile. 257 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181499g00001 496 FunFam serine/threonine-protein kinase PBS1-like 225 331 - -
Stsc181499g00001 496 SUPERFAMILY Protein kinase-like (PK-like) 236 477 IPR011009 -
Stsc181499g00001 496 ProSitePatterns Protein kinases ATP-binding region signature. 263 285 IPR017441 GO:0005524
Stsc181499g00001 496 Gene3D Phosphorylase Kinase; domain 1 231 331 - -
Stsc181499g00001 496 Gene3D Transferase(Phosphotransferase) domain 1 332 490 - -
Stsc181499g00001 496 Pfam Protein tyrosine and serine/threonine kinase 258 466 IPR001245 GO:0004672|GO:0006468
Stsc181499g00001 496 PANTHER RUST RESISTANCE KINASE LR10-RELATED 229 482 IPR045874 GO:0004672
Stsc181499g00001 496 FunFam Os07g0541700 protein 332 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181499g00001 Stsc-Chr181499 13 1585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181499g00001 199 490 Receptor kinase-like Gene Family AT4G18250 44.147 7.21e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc181499g00001 PK_Tyr_Ser-Thr 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181499g00001 - - adu:107495716 684.485