Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181498g00009 ATGGCTTCAATGAAGAATGATAATGATCAGAGCAGTGTTGTTCCATTTTCTTCTTCTTCTTCTCTTCTGTCTGGCCAAAACGAAAGATCCATGGCAATTGCACCCATGACAGCCAACAAGGGAACCAGCACCACCAGACGCAGGGGGGACCGCCACATCAAGGTTGATGGCCGAGAGCGCCGTGTCCGCATGTCCATCCCATGCGCTTCCTTTCTTTTCCAACTCACTCGCGAGCTCAACAACAAGACCGATGGTGAGACTATCGAGTGGCTCCTCCGCCATGCAGAGCCCGCCATCATCGCCGCCACTGGCCACGGTGTTCCACCCACCATCCGCCCAGCTGCAGCAGGAGACAACCCCATTTCTTCTGTTGCAGTTGCACCACCACCACCACCACCACCCAGTGAGGACAACGTGAATTTTGGTGCTGCTAATAACAAGGACATTGATGATGATGACATGCAGGGTGCAAAAGATGATGAGCCGTTGTTTCCAGTCTCGGATGATTTTGATTTGCTTGGCAACCCTATCTATTGGGATTTTAATTTGCAGTAA 555 0.5135 MASMKNDNDQSSVVPFSSSSSLLSGQNERSMAIAPMTANKGTSTTRRRGDRHIKVDGRERRVRMSIPCASFLFQLTRELNNKTDGETIEWLLRHAEPAIIAATGHGVPPTIRPAAAGDNPISSVAVAPPPPPPPSEDNVNFGAANNKDIDDDDMQGAKDDEPLFPVSDDFDLLGNPIYWDFNLQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181498g00009 184 MobiDBLite consensus disorder prediction 146 165 - -
Stsc181498g00009 184 MobiDBLite consensus disorder prediction 1 43 - -
Stsc181498g00009 184 MobiDBLite consensus disorder prediction 118 166 - -
Stsc181498g00009 184 MobiDBLite consensus disorder prediction 1 50 - -
Stsc181498g00009 184 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 147 IPR005333 GO:0003700
Stsc181498g00009 184 ProSiteProfiles TCP domain profile. 48 102 IPR017887 -
Stsc181498g00009 184 Pfam TCP family transcription factor 49 107 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181498g00009 Stsc-Chr181498 55831 56617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181498g00009 33 109 TCP Transcription Factor Family AT5G08330 60.000 3.06e-25 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc181498g00009 TCP 7.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181498g00009 - K16221 aip:107610427 190.274