Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181498g00001 | ATGGAGCGTGGTGGTCTTACAGAGAAGGTGAGTAGGGACAAAGTTTTGGTATTCCGCTTTGTGGATGTGGGAAAACTTCCCCCTCCTGTCCTCCAGTTTGTTGAGGTGGCATTTGGTTACACTCCTGAGAATCTCATATACAAGAACATTGACTTTGGGGTTGATTTAGACTCTAGGATTGCTCTGGTTGGACCCAACGGAGCTGGGAAGAGTACATTACTTAAGTTAATGACAGGTGAACTGGTTCCTACAGATGGCATGGTTCGACGCCATAATCATCTTAGAATTGCACAATATCACCAGCATTTAGCCGAAAAGCTAGACATGGAAATGTCAGCTCTCCTGTATATGATGAGAGAATACCCTGGAAACGAGGAAGAGAGGATGAGAGCTGCTATTGGGAAGTTTGGACTATCGGGTAAAGCCCAGGTGATGCCCATGAAGAATTTATCTGACGGGCAGAGGAGCCGTGTGATATTTGCATGGTTAGCCTATAGGCAGCCTCACATGCTACTCTTGGATGAGCCAACCAATCATTTGGATATTGAGACGATTGATTCGTTGGCGGAGGCATTGAATGAATGGGATGGTGGGATGGTGCTTGTTAGCCATGATTTTAGGCTCATAAACCAGGTGGCTCATGAGATATGGGTGTGCGCAGATCAAAGCGTCACCAGATGGGAAGGCGATATTATGGATTTCAAGCAGCATCTAAAGGCAAAAGCGGGTTTATCTGACTGA | 741 | 0.4602 | MERGGLTEKVSRDKVLVFRFVDVGKLPPPVLQFVEVAFGYTPENLIYKNIDFGVDLDSRIALVGPNGAGKSTLLKLMTGELVPTDGMVRRHNHLRIAQYHQHLAEKLDMEMSALLYMMREYPGNEEERMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQSVTRWEGDIMDFKQHLKAKAGLSD | 246 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181498g00001 | 246 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 31 | 246 | IPR003439 | GO:0005524 | |
Stsc181498g00001 | 246 | PANTHER | ATP-BINDING TRANSPORT PROTEIN-RELATED | 2 | 241 | - | - | |
Stsc181498g00001 | 246 | CDD | ABCF_EF-3 | 31 | 222 | - | - | |
Stsc181498g00001 | 246 | Pfam | ABC transporter | 47 | 178 | IPR003439 | GO:0005524 | |
Stsc181498g00001 | 246 | SMART | AAA_5 | 56 | 244 | IPR003593 | GO:0016887 | |
Stsc181498g00001 | 246 | Gene3D | - | 8 | 244 | IPR027417 | - | |
Stsc181498g00001 | 246 | FunFam | ATP-binding cassette sub-family F member 3 | 1 | 245 | - | - | |
Stsc181498g00001 | 246 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 14 | 225 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc181498g00001 | Stsc-Chr181498 | 1 | 1340 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc181498g00001 | 31 | 224 | Calmodulin-binding Proteins | AT2G36910 | 25.000 | 7.95e-12 | 63.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181498g00001 | K06185 | - | pvy:116144971 | 479.559 |