Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181495g00008 ATGGCTTCAACACATCCTGATCGAAATGTTCTAAGAAATTTTCGTTTTGGTTGTTATACAAAGAAGCTAGCCAAAAGTTATATGAAGAGTAATAACTTGTACGTGCCAGTGGGTTTTGGTGAGGAGCTTCGTCTATTTGGGAGGAGGTCAACTTGGACTATTATAGGACCTCTTGGGATAGATAACAGGCTGTTTACCTTCCAGGCAACCAATAAGCATGACCGCAATTCGCTTGAGTACTATTTAGGTGGGTCAGGTTGGCAGCGTTTCCGAAAAGAGTATAGATTAAGGACTTTTGATTCGCTGGAGTTTCATATTATTGATTGGAGGAAGAAGGCGATAAGGGTTCGGATGATGAGGTACCACCGTGGTGGATAA 378 0.4206 MASTHPDRNVLRNFRFGCYTKKLAKSYMKSNNLYVPVGFGEELRLFGRRSTWTIIGPLGIDNRLFTFQATNKHDRNSLEYYLGGSGWQRFRKEYRLRTFDSLEFHIIDWRKKAIRVRMMRYHRGG 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181495g00008 125 Pfam B3 DNA binding domain 21 117 IPR003340 GO:0003677
Stsc181495g00008 125 Gene3D - 10 122 IPR015300 -
Stsc181495g00008 125 SUPERFAMILY DNA-binding pseudobarrel domain 18 118 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181495g00008 Stsc-Chr181495 59395 60361 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Stsc181495g00008 B3 3.1e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181495g00008 - K24496 han:110864187 31.187