Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181492g00012 TCTCTCTTGATCTTTTCCAATCCGGTTGCACCACGTGACATGGGGATTGAACCTCTTTCCTCCACACCATTCAGTTTCACTGGATTCCAAGGCGGTTATGCTTCTTCTGATACACAACGAGAGAAGGCTATTATGTCACAAGAGAAGCATAGTTTCTCAGTAATAATGGAGTTAGATGATGATGGAGGAGATAATAATTTGTTCAAAGATCAAAACCAGCAGCATCAGCAACATGAACATGATCATGATGATGATAATGTTGATGTCAAAGTTGATGGCATGATCTTAGAAGAAGATGTCAATTTTCCAATTTCACAAGAGTTTCAAGAAACTACAGAGCTAAAGAATATTATTCAAGCACCGTCACCTTTGGCAATAGCATCATTGGAGCTCTTGAGGAACTACGGAAGCAAGTTCAAGAAGCTGAGCGGGGAAAACATAAGCGACAACTTCAGCGACATCATGGAGACTAGTACTTGTTCGGAGAATCAAAGATTATCAACTGAAGAAATCATGAGAGTTGCAGGGGCAAGGTATGTCCATTACTCTGCACACTGGAATGATGATTTCTGCGTCCCCATGCATCCTTATGGATTGGATCTCGGAAACTTGTCCGAACAAGAGAGCAGAGATGTGGAGCTTGCTCAGTTTCTACTAGCTGCAGCAGAGAGAGTAGGTTGCCAGCAATTCGAACGCGCCAGCCGCTTACTCCTTCATTGTCAATGGAATTCAGATGTCAATGCAAACGCTGCTCAGAGGGTTATCTTTCATTTCTCAGAAGCTCTTCGTGAAAGGATCAGTAAAGAAACTGGAAGGGCAGAAGTCGGAATATTGTCATCATATTATGATGATAATAAGAATCAAGAAACTGAGATGCTTCAAAAGATGAGTATCAATGAGTCCCTTAAATGCCATCAGAAAATGCCTTTCAACCAAGTAATGCAATTCACTGGTATACAAACTATGGTGGAACATCTTGCTTCTGAGACCAAGATACACCTCATTGATCTTGATATCAAAAGCGGAGTGCAGTGTACGGCTCTGATGCAAGCGCTGGCAGAGCGGAAAGAGTGTTGTGTGACATCTCTAAGGGTATCTGCCATTGGAACTTGCTCTTACAAGAACAGGATAGAAGATACAGGACAAAGGTTAAGGAGTTTTGCTGAATCACTAAACCTACCATTTTCATATATGGCGGTTATTGTAACAGATTTGGCAGAAATCAAGCTGGATGATTTCGACGTGGATGATGATGAAGCAGTTGCTGTGTACTCTCCTTATTTTCTGAGGACTCTGATATCGAGGCCTAGTTGCTTGGAAAATTTGATGCTAGTTATAAGGAATATCAAACCCTCTATTATGATAATGTTGGAAATAGACTCAAATCATAACTCGCCTTCTTTTGTGAACCGATTCATTGAAACGTTGTTCTTTTATTCAGCTTTCTTTGATTGTATTGAAACTTGCCTGCAAGAAGATGGTGAGAGCAGAATGGCAGTGGAAACAGTGTGTTCCATTGGTATAAGAAATATTGTTGCTGCTGAAGGCACAGAAAGGACAGTTAGGAATGTGAAGTTAGATGTTTGGAGAAGGTTCTTCGCCAGGTATCGAATGGTGGAAACTGGGTTCAGTGAATCTTCGCTTTACCAAGCTAACTTAGTTGCTAAAGAGTTCAATTTTGGCAAGTTCTGCAGTGTGGACAAAAATGGTAAGAGTCTAATTGTTTCATGGAAGGGAACTCCAATGCATTCACTCTCAGCTTGGAGGTTTGTATGA 1776 0.4105 SLLIFSNPVAPRDMGIEPLSSTPFSFTGFQGGYASSDTQREKAIMSQEKHSFSVIMELDDDGGDNNLFKDQNQQHQQHEHDHDDDNVDVKVDGMILEEDVNFPISQEFQETTELKNIIQAPSPLAIASLELLRNYGSKFKKLSGENISDNFSDIMETSTCSENQRLSTEEIMRVAGARYVHYSAHWNDDFCVPMHPYGLDLGNLSEQESRDVELAQFLLAAAERVGCQQFERASRLLLHCQWNSDVNANAAQRVIFHFSEALRERISKETGRAEVGILSSYYDDNKNQETEMLQKMSINESLKCHQKMPFNQVMQFTGIQTMVEHLASETKIHLIDLDIKSGVQCTALMQALAERKECCVTSLRVSAIGTCSYKNRIEDTGQRLRSFAESLNLPFSYMAVIVTDLAEIKLDDFDVDDDEAVAVYSPYFLRTLISRPSCLENLMLVIRNIKPSIMIMLEIDSNHNSPSFVNRFIETLFFYSAFFDCIETCLQEDGESRMAVETVCSIGIRNIVAAEGTERTVRNVKLDVWRRFFARYRMVETGFSESSLYQANLVAKEFNFGKFCSVDKNGKSLIVSWKGTPMHSLSAWRFV 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181492g00012 591 ProSiteProfiles GRAS family profile. 205 589 IPR005202 -
Stsc181492g00012 591 MobiDBLite consensus disorder prediction 63 86 - -
Stsc181492g00012 591 Pfam GRAS domain family 215 589 IPR005202 -
Stsc181492g00012 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 160 578 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181492g00012 Stsc-Chr181492 63162 65035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181492g00012 204 590 GRAS Transcription Factor Family AT2G01570 28.244 1.41e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc181492g00012 GRAS 3.6e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181492g00012 - - ahf:112695737 890.567