Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181492g00011 ATGATCTTAGAAGATGCCAATTTTGCCCCTGACGGTGATGGTCTTCAACCATTTTCACAAGAGTTTCAACCACCATCATCTTCGGCAATAGCATCATTGGATCTCTTGAGAAACTACGGAAGCAAGTTCAAGAAGCTGAACGGGGAAATCATCGAGAGTAGTGCCTCTTCGGAGAATCAAAGATTGTCAACGGAAGAAATCATAAGAGTTGCAGGGGTAACGTATGTGCATTACTCTGCACACTGGAATGATGATTTCAGCATCCCCATGCACCCTTACGGCTTGGATCTCGGAAACTTGTCCGAACAAGAGAACAGAGATGTGGAGCTTGCTCAGTTTCTACTAGCTGCTGCAGAGAGAGTAGGGTGCCAGCAATTTGAACGCGCCAGCCGCTTACTCCTCCATTGTCAATGGAATTCAGATGTCAATGCAAACGCTGCTCAGAGGGTTATCTTTCATTTTGCAGAAGCTCTTCGTGAAAGGATCGTTAAAGAAACTGGAAGGGCAAAAGTGGGAATACATAATCACAATCAAAATCAAAATCAAGAAACTGAGATGCTTCAAAAGATGAGTTTTAACGTGTCCCTTAAGTGCCATCAGAAAATGCCTTTCAACCAAGTAATGCAATTCACTGGTGTACAAACTATGGTGGAACATCTTGCTCGTGAGACCAAGATACACCTGATAGATCTTGATATCAGATGCGGAGTGCAGTGTACGGCTCTGATGCAAGCGCTGGTTGAGCGGAAAGTGTGTCGTGTGAAATCTCTAAAGATCTCTGCCATTGGAACTAGTGCATGCAAGAACAAGATAGCAGATACAGGGCAAAGGTTAACGAGTTTTGCTGAATCACTGAACTTGCCGTTTTCATATAAGGCGGTTATTGTAACAGATTTGTCAGAAATCAAGTTGGATGATTTCGATGTGGATAGAAATGAAGCCATTGCTGTATACTCTTCTTATTTTCTGAGGACTCTGATATCGAGGCCTAATTGCTTGGAAAACTTGATGCTGGTTATAAGGAATATCAAACCATGTATTATGATAGTGATGGAAACAGAATCAAATCATAACTAG 1077 0.4225 MILEDANFAPDGDGLQPFSQEFQPPSSSAIASLDLLRNYGSKFKKLNGEIIESSASSENQRLSTEEIIRVAGVTYVHYSAHWNDDFSIPMHPYGLDLGNLSEQENRDVELAQFLLAAAERVGCQQFERASRLLLHCQWNSDVNANAAQRVIFHFAEALRERIVKETGRAKVGIHNHNQNQNQETEMLQKMSFNVSLKCHQKMPFNQVMQFTGVQTMVEHLARETKIHLIDLDIRCGVQCTALMQALVERKVCRVKSLKISAIGTSACKNKIADTGQRLTSFAESLNLPFSYKAVIVTDLSEIKLDDFDVDRNEAIAVYSSYFLRTLISRPNCLENLMLVIRNIKPCIMIVMETESNHN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181492g00011 358 ProSiteProfiles GRAS family profile. 101 358 IPR005202 -
Stsc181492g00011 358 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 80 356 IPR005202 -
Stsc181492g00011 358 Pfam GRAS domain family 111 358 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181492g00011 Stsc-Chr181492 60159 61235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181492g00011 100 358 GRAS Transcription Factor Family AT1G66350 30.153 3.33e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc181492g00011 GRAS 3.4e-46 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181492g00011 - - ahf:112695737 542.732