Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181491g00004 ATGTCATTCTCACCTCCTCCACCACCACCATCACTGGCCACTCCGTCATCAGCGCCCCCGATGGACCTCCCAGTACGTCAGATCCCGGGAAGCTACGGCTGGCCGTTGGTGGGTTCAATATCGGACAGGCTCGACTACTTCTGGTTCCAGAAGCCCGAGAGCTTCTTCAGGAAAAGAATGGAGAAGCACAAGAGCACAGTTTTCCGTACCAACGTTCCTCCGTCGTTTCCCTTCTTCTTGAACGTTAATCCTAATGTCATCGCCGTCCTCGACGTTAAGTCATTCTCCCACCTCTTCGACATGGATCTCGTCGAGAAAAGGGATATTCTTGTCGGAGACTTTGTCCCCAGCCTCGCCTACACCGGAAACATGAGAGTCGGCGTTTATCAAGATCCTTCCGAACCTCAACATGCCAAGGTGAAGGATTTCTCAATGGACATCCTTAAACGGAGTTCAGGAATATGGGCATCTGAACTAGTATCAAACCTAGAAAAAATGTGCGACAACCTCGAATCCACACTCTCCAATTCTTCTTCCGCAAGCTACCTTTTCCCTTTACAGCAGTTCCTCTTCAAGTTCCTCACCAAGACCCTCTCCGGAGCTGACCCCTCCGTCGATGCCAAGATTGCCGACGGAGGCCACCTCATGTTTGACCGCTGGCTGGCCCTTCAGCTCCTCCCCACAGTCCCCATAGGCATTATCCAACCGTTAGAGGAGATCTTCCTCCACTCCTACGCCTACCCTTTCTTCCTCGTCAGTGGTGACTACAACAACCTCTACAACTTCATCAAACAACATGGGAAGGAAGTGGTTAAAAGAGGTGAAGTGGAGTTTGGGTTGACCGAAGAAGAAGCCATTCACAACCTTCTCTTCATTCTTGGCTTCAACGCATTCGGAGGCTTCTCCGTATTCCTCCCCAGCCTCATTGACGCTATAGCCACCGACACCACAGGCCTACAACGCCAACTGGCCAAGGAAGCAAGGGAAAATGGCGGCTCAACCCTCACCCTCAACTCACTCAAAGACATGCCACTCACCAACTCCGTCGTCTACGAGGTGCTCCGCCTCAATCCACCGGTTCCCCTCCAGTACGCCCGAGCGAGAAAGGATTTCACACTGAGTTCACATGACTCGGCCTTCCGAGTCACCAAGGGCGAGTTACTCTGCGGTTTCCAGAAACTTGTTATGAGGGACCCACTTGTGTTTCAAGAACCGGAGAGTTTTAAGCCGGACCGGTTCACTAACGATGGGGCCCAATTATTGGACTACTTGTTTTGGTCCAATGGGCCTCAGAGTGGGTCCGCTACTGCATCCAATAAGCAGTGCGCTGGAAAAGACATTGTGCCCCTTACTGCTGCCTTGATTGTGGCCCACTTGTTTCGTAGGTATGATTTAATTAAGGGGGATTCTAGTTCCATCACTGCCCTTAAGAGGGCCCAATGA 1443 0.517 MSFSPPPPPPSLATPSSAPPMDLPVRQIPGSYGWPLVGSISDRLDYFWFQKPESFFRKRMEKHKSTVFRTNVPPSFPFFLNVNPNVIAVLDVKSFSHLFDMDLVEKRDILVGDFVPSLAYTGNMRVGVYQDPSEPQHAKVKDFSMDILKRSSGIWASELVSNLEKMCDNLESTLSNSSSASYLFPLQQFLFKFLTKTLSGADPSVDAKIADGGHLMFDRWLALQLLPTVPIGIIQPLEEIFLHSYAYPFFLVSGDYNNLYNFIKQHGKEVVKRGEVEFGLTEEEAIHNLLFILGFNAFGGFSVFLPSLIDAIATDTTGLQRQLAKEARENGGSTLTLNSLKDMPLTNSVVYEVLRLNPPVPLQYARARKDFTLSSHDSAFRVTKGELLCGFQKLVMRDPLVFQEPESFKPDRFTNDGAQLLDYLFWSNGPQSGSATASNKQCAGKDIVPLTAALIVAHLFRRYDLIKGDSSSITALKRAQ 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181491g00004 480 PRINTS E-class P450 group IV signature 380 394 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181491g00004 480 PRINTS E-class P450 group IV signature 343 359 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181491g00004 480 PRINTS E-class P450 group IV signature 396 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181491g00004 480 Pfam Cytochrome P450 319 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181491g00004 480 MobiDBLite consensus disorder prediction 1 20 - -
Stsc181491g00004 480 MobiDBLite consensus disorder prediction 1 17 - -
Stsc181491g00004 480 FunFam Allene oxide synthase, chloroplastic 23 480 - -
Stsc181491g00004 480 PANTHER CYTOCHROME P450 26 23 463 - -
Stsc181491g00004 480 Gene3D Cytochrome P450 23 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181491g00004 480 CDD CYP74 57 472 - -
Stsc181491g00004 480 SUPERFAMILY Cytochrome P450 24 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181491g00004 Stsc-Chr181491 25339 28699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181491g00004 101 480 Cytochrome P450 AT4G15440 57.031 2.48e-161 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181491g00004 K10528 - gmx:100784395 705.286