Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181489g00004 ATGGCCATCTTTCTCTATGTAGCAATAATTGCCTCATTATATTATTTGTTCCATAGGAGATTATGTTGCAAGAGCCCTTACTTCATAGATTGGCCTATCATTGGCATGTTACCGAAAGTGTTGTGGAACTTGCATAGGATCCATGATTTTGCAACCGACGACATTTTTAAACAACGTGGGAAAACCGGTGAATTCATGGGACCTTGGTTCACCAAAATGAACTATATGGTCACTAGTGACCCCATGAATGTGCATCACATAATGAGCAAGAGTTTTGACAACTATGTCAAGGGCTCCAAGTTCCGCGAGATTTTCCAGGCCTTTGGACTTGGAATTTTCACGTCGGATTCGGAGACCTGGAGGTACCACAGGTCCTTACTTCTCTCGTTTTTCAAGAACAGAAAGTTCGAGATGTTTCTAGAGAAGACAATCCATAAGAAGGTGACATGTAGCTTGATTCCCACGTTAGAACACGTGAAACAACATGGGATTGAGGTTGATCTACAAGATATCTTCAGCAGGTTCACATTTGATAACATATGTTCTATAGTTTTAGGGTATGATCCTAATTGTCTTTCTATTGAGTTCCCTCATGTTGCATGTGAGAAGGCTTTTAATGAAGCTGAAGAGTCCATATTCTATAGGCATGCTGTCCCAAAGAGTGTTTGGAAGCTTCTAGAATGGTTTCAAATAGGTGAAGAGAGAAAGATGAGTGAAGCTTGTAAGGTGTTTGACAAATTCATATATTCATGCATAGCATCAAAGAGAGAAGAGCTAAGCAAGTACAACAAAAGTAGTCAAATAGATGAATCTCAAGTTGACTTGCTTAGTGTTTTGATGAAGATGAGAGAAGAAGAAGAATCTAAAAAGGGTGAAACCCTAATACATGATGATAAGTTTCTAAGAGACTCAGCTTTTAATATTTTTGTAGCTGGAAGAGATACCATAACTTCAGCTCTTACTTGGTTTTTTTGGCTTGTTGCTAAAAACCCATCAGTTGAAGCCAAGATTCTTGAAGAGATCAAGAAAAATTTCGGAGCAAATAATGACGACATGAAACACAAAATTTTAAGCATTGAAGAGGTGAAAAAGCTAGTTTATCTCCATGGTGCTTTTTGTGAATCTTTGAGGCTTTTTCCTCCTATTCCTTTTGAGAGCAAGCAAGCAATCAATGGTGATGTACTCCCTAGTGGACATCATGTTAGACCAAATACAACTATTTTACTTTCTTTGTTTTCAATGGGAAGATTTGAAGAGATATGGGGAAAAGATTGCTTGGAATTTAAGCCAGAGAGATGGATATCTGAAAAAGGAGGAATAATTCATGTGCCTTCTTACAAGTTTATTAGTTTTAATGCCGGACCAAGAACTTGTTTGGGAAAAGACTTGTCTTTTATACAACTGAAGATGGTGGCAGCTGCTATTTTGTGCAACTATTGTATACAAGTAGTGGAAGGTCATGAAGCTATACCAAGCCTCTCAATTGTTCTTCTAATGAAGGGTGGTTTGAAGGTTAGGATAACTAAAAGAGAAGTAGTGTAA 1542 0.3781 MAIFLYVAIIASLYYLFHRRLCCKSPYFIDWPIIGMLPKVLWNLHRIHDFATDDIFKQRGKTGEFMGPWFTKMNYMVTSDPMNVHHIMSKSFDNYVKGSKFREIFQAFGLGIFTSDSETWRYHRSLLLSFFKNRKFEMFLEKTIHKKVTCSLIPTLEHVKQHGIEVDLQDIFSRFTFDNICSIVLGYDPNCLSIEFPHVACEKAFNEAEESIFYRHAVPKSVWKLLEWFQIGEERKMSEACKVFDKFIYSCIASKREELSKYNKSSQIDESQVDLLSVLMKMREEEESKKGETLIHDDKFLRDSAFNIFVAGRDTITSALTWFFWLVAKNPSVEAKILEEIKKNFGANNDDMKHKILSIEEVKKLVYLHGAFCESLRLFPPIPFESKQAINGDVLPSGHHVRPNTTILLSLFSMGRFEEIWGKDCLEFKPERWISEKGGIIHVPSYKFISFNAGPRTCLGKDLSFIQLKMVAAAILCNYCIQVVEGHEAIPSLSIVLLMKGGLKVRITKREVV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181489g00004 513 PANTHER CYTOCHROME P450 21 505 - -
Stsc181489g00004 513 Gene3D Cytochrome P450 17 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181489g00004 513 SUPERFAMILY Cytochrome P450 27 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181489g00004 513 CDD CYP86A 64 503 - -
Stsc181489g00004 513 Pfam Cytochrome P450 41 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181489g00004 513 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181489g00004 513 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181489g00004 513 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181489g00004 513 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181489g00004 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Stsc181489g00004 513 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181489g00004 513 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181489g00004 513 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181489g00004 513 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181489g00004 Stsc-Chr181489 14970 16511 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181489g00004 1 510 Cytochrome P450 AT2G23180 45.455 1.50e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181489g00004 - - gmx:100779590 699.508