Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181487g00012 ATGAGTTGTGGCTGCTTTGGAGCCTCAACTCTCAAGAAGAAAAGTCCTTCTCATACTCCCAATGAAATTGACGGCTATCCACTTGATAATGTTAAACATTTCTCTGACAAAGAACTGAGATTGGCTACTGATAATTATCATCCAAGCAATAAGATAGGACGAGGAGGTTTTGGAACTGTTTACAAGGGAACCTTAAAAGATGGGAGACAAGTAGCAGTGAAGACCCTTTCAGCCGGGTCAAGGCAAGGAGTTCGTGAATTTTTAACCGAGATTAAAACTATATCAAATGTTAAGCATCCAAACCTAGTTGAATTGGTCGGTTGCTGCATTCAAGGACCTAATCGGATACTAGTCTACGAGCACAAGGGGTATAAACATAAGACTAGACTGGAGAAAAAGATCTATTATTTGCATGGGCACTGCTAG 426 0.4061 MSCGCFGASTLKKKSPSHTPNEIDGYPLDNVKHFSDKELRLATDNYHPSNKIGRGGFGTVYKGTLKDGRQVAVKTLSAGSRQGVREFLTEIKTISNVKHPNLVELVGCCIQGPNRILVYEHKGYKHKTRLEKKIYYLHGHC 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181487g00012 141 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 121 - -
Stsc181487g00012 141 ProSiteProfiles Protein kinase domain profile. 46 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181487g00012 141 Gene3D Phosphorylase Kinase; domain 1 17 121 - -
Stsc181487g00012 141 SUPERFAMILY Protein kinase-like (PK-like) 24 123 IPR011009 -
Stsc181487g00012 141 MobiDBLite consensus disorder prediction 1 26 - -
Stsc181487g00012 141 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Stsc181487g00012 141 Pfam Protein tyrosine and serine/threonine kinase 49 121 IPR001245 GO:0004672|GO:0006468
Stsc181487g00012 141 FunFam cold-responsive protein kinase 1 17 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181487g00012 Stsc-Chr181487 61658 64634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181487g00012 34 121 Receptor kinase-like Gene Family AT1G53430 59.091 9.71e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc181487g00012 PK_Tyr_Ser-Thr 3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181487g00012 - - gmx:100788143 220.705