Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181487g00007 ATGTTACCATCTTTCTTCATTCTCTTATTCATCATAAAATGGCAGAATTCGAAACCCAGAAACAAAAACTCACCGCCTTCACCTCCAAAACTACCCGTCCTGGGAAACATGCACCAAGTAGGGTTGTTCCCACACCGGTCACTGAAAGCCTTGGCTGAGAAACATGGGCCCTTGATGCTCCTCCACTTCGGGAAGGTTCCGGTGCTGGTGGTGTCTTCGGCCGAGACGGCAGAAGAGGTGATGAAGACGCACGACTTGGTGTTGTCGAACAGGCCAAAGCGCAAGATGAGTGACATACTCTTGTATGATTCCAAAGACATAGCCAACTCTCCTTATGGTGAATACTGGAGGCAGATTAGGAGCATAAGCGTGTTGCACCTTCTGAGCAACAAAAGGGTTCAATCGTACGGTCGTGTTAGAGAAGAAGAAGCTGCAACAATGGTTGAAACCATCAAAGAGTCTTCTTCTGTGCCGGTAAACTTGACTGAGATATTCTCCGGTGTTACCAATGACATAGTGTGTAGGATTGCTCTAGGGAGGAAGTACCGTGTAGGAGAAGAAGGGAGCAAGTTTCAGGAGCTGTTGTTGGAGTTTGGAGAGTTGTTGGGTTCAATATCTATAGGGGACTATGTTCCTTGGCTTAGTTGGTTGAACAAGGTTAATGGTTCTTATAAAAGAGCAACTAGAGTTGCAATGCGTTTTGATGAGTTCTTGGATCAAGTGATTGCGGAGCATCTTAGTTCTTTGAAATGCGTTGATGTTGATGTTGATGAGGACCAGAAAGATTTTGTGGATGTTTTGCTTTCTGTCAAGAACACTAGTAACTCTACTGGATTTGAATTTGATACAATAACAATGAAGGCACTAATCCTGGACATGTTTGCGGCAGGTACAGACACTACCTACACAGTGCTAGAATGGGCAATGGCAGAACTGTTAAAACGGCCAGCAGTTATGCACAAACTGCAAGAAGAAGTGAGAACTGTTGTTGGAAACAGAACCAACATAACAGAACAAGATCTGGTTCACATGAACTACTTGAAAGCTGTGATCAAAGAAACACTTAGGTTCCACCCTCCAATTCCTGTTCTAGTTCCTAGAGAATCCACCAAAGCCATCAAGCTGAATGGGTATGACATTGGAGAAGGAACACAGGTGTTGGTGAATGCATGGGCCATTGCAACGGATCCAAAGTGTTGGGACCAGCCACTTGAGTTCAAGCCAGAGAGGTTCTTAAACAGTTCGGTGGATTTCAAAGGGCAGCATTTTCAGTTTATTCCTTTTGGTGCAGGGAGGAGAGGGTGCCCTGGGATGCAGTTTGCCACTGCTGTTAATGAGATTGTGCTGGCTACCCTTGTTCATCACTTTGATTGGGATTTGCCTCCTGATTCTGGAGAATTGGACATGTCTGAAACTTCTGGACTTACTGTGCATTTGAAATCACCTCTCTTGGCTATACCAACTCCTCATTATCAATGA 1479 0.4476 MLPSFFILLFIIKWQNSKPRNKNSPPSPPKLPVLGNMHQVGLFPHRSLKALAEKHGPLMLLHFGKVPVLVVSSAETAEEVMKTHDLVLSNRPKRKMSDILLYDSKDIANSPYGEYWRQIRSISVLHLLSNKRVQSYGRVREEEAATMVETIKESSSVPVNLTEIFSGVTNDIVCRIALGRKYRVGEEGSKFQELLLEFGELLGSISIGDYVPWLSWLNKVNGSYKRATRVAMRFDEFLDQVIAEHLSSLKCVDVDVDEDQKDFVDVLLSVKNTSNSTGFEFDTITMKALILDMFAAGTDTTYTVLEWAMAELLKRPAVMHKLQEEVRTVVGNRTNITEQDLVHMNYLKAVIKETLRFHPPIPVLVPRESTKAIKLNGYDIGEGTQVLVNAWAIATDPKCWDQPLEFKPERFLNSSVDFKGQHFQFIPFGAGRRGCPGMQFATAVNEIVLATLVHHFDWDLPPDSGELDMSETSGLTVHLKSPLLAIPTPHYQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181487g00007 492 PANTHER CYTOCHROME P450 71B11-RELATED 13 489 - -
Stsc181487g00007 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Stsc181487g00007 492 FunFam Cytochrome P450 83B1 11 486 - -
Stsc181487g00007 492 SUPERFAMILY Cytochrome P450 25 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 Pfam Cytochrome P450 25 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 Gene3D Cytochrome P450 17 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS E-class P450 group I signature 76 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS E-class P450 group I signature 168 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS E-class P450 group I signature 52 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181487g00007 492 CDD CYP71-like 54 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181487g00007 Stsc-Chr181487 24102 26931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181487g00007 15 488 Cytochrome P450 AT3G48270 48.847 9.23e-178 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181487g00007 - - gmx:100819183 630.557