Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181486g00009 ATGTCAACTAAGGGTAACATAGGCGCTTGGGCCGCCGATGCTGAGAGGGAGGAGCAGGAGGCTGCTGCCGCTGCAGCAACTACCGGCGCTGCTGGAGTCGCCGGATCGGAGAACTTCCCGAGCCTGAAGGAAGCCGTTTCCGCCAAGCCCAAGAAGAAGAAGATGACGCTCATGGAGTTCACCACTGGGAACTACGCCGGCGGTGGTGCCGGGGGGTTCGCGAGGAAGCAGAGGGGCTTAACGCCGGACGAGATGCTCCGCCTTCCGACGGGGCCTAAGGAACGCTCCGCCGAGGAAATGCAGTACGGCCGCGGGTTCTCTAACTACGGCGGCGGCCGCTCCGGTCCGCCGCCTGGCCGAGGTCCGGACCGCGACGATGGCAACGGTTCCTGGGGCGGAGGAAGGAGATCCTATGGTGAGTTCGATGAAGAGCGCAGGGGTGGTCCCCGTTCTAGGGTTTCGGATTTCGATCAGCCTTCGAGGGCCGACGAGGTGGACAATTGGGCTTCGGTGAAGAAACCGGTTCAGGCATTCGATTCCGGTAGGCAAAATCGGTACGGTTCTGTTGGCGGTGGCAATGTCGACGGCGGTGTTGGTGGTTCTAGAGCGGATGAAGTGGATAATTGGATGGCTGGCAAGAAGCCTCTTCCTTCTAGATCTTCCACATTTGGTTCGGGGTTCCGCGATTCAGTTCCGGAGCCTGATCGCTGGACAAGTGGCAAGCGTGACGTGCGCGATTCACGTGACAGCGATCGGGAGCGGCCGAGATTGGTGCTGGACCGGCCGCAAGGCAATGGTTCCGTGAACGAAACGGAGGCAGTGGTGAAGACGAAGAAGCCGAACCCTTTTGGCGCAGCGAGGCCAAGGGAGGAGGTTTTGGCTGAAAAAGGATTGGATTGGAAGAAGCTCGATTCGGAGATTGAATCGAAGAGGCCCATGAGTGCACACTCCAGTAGGCCCTCCAGTGCCCAGTCGAGTCGCTCCGAGGCGCCTGCGTCAGAGGATTCGGTTAAGCCGAAGGCGAAGGTGAATCCCTTTGGGGATGCCAAGCCTAGGGAGGTTTTGCTGGAGGAGAAGGGAATGGATTGGAAAAAGATTGATCTTGAATTGGAGCATGGCCGTATTGATAGAAACAACAGAGGAAAAATTGCTGAAAGAAGAAATTGA 1167 0.5818 MSTKGNIGAWAADAEREEQEAAAAAATTGAAGVAGSENFPSLKEAVSAKPKKKKMTLMEFTTGNYAGGGAGGFARKQRGLTPDEMLRLPTGPKERSAEEMQYGRGFSNYGGGRSGPPPGRGPDRDDGNGSWGGGRRSYGEFDEERRGGPRSRVSDFDQPSRADEVDNWASVKKPVQAFDSGRQNRYGSVGGGNVDGGVGGSRADEVDNWMAGKKPLPSRSSTFGSGFRDSVPEPDRWTSGKRDVRDSRDSDRERPRLVLDRPQGNGSVNETEAVVKTKKPNPFGAARPREEVLAEKGLDWKKLDSEIESKRPMSAHSSRPSSAQSSRSEAPASEDSVKPKAKVNPFGDAKPREVLLEEKGMDWKKIDLELEHGRIDRNNRGKIAERRN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181486g00009 388 MobiDBLite consensus disorder prediction 19 39 - -
Stsc181486g00009 388 MobiDBLite consensus disorder prediction 314 332 - -
Stsc181486g00009 388 MobiDBLite consensus disorder prediction 63 354 - -
Stsc181486g00009 388 MobiDBLite consensus disorder prediction 234 259 - -
Stsc181486g00009 388 MobiDBLite consensus disorder prediction 368 388 - -
Stsc181486g00009 388 Pfam Plant specific eukaryotic initiation factor 4B 4 379 IPR010433 GO:0003743
Stsc181486g00009 388 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 334 380 IPR010433 GO:0003743
Stsc181486g00009 388 MobiDBLite consensus disorder prediction 137 168 - -
Stsc181486g00009 388 MobiDBLite consensus disorder prediction 283 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181486g00009 Stsc-Chr181486 59064 63029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181486g00009 38 377 Eukaryotic Initiation Factors Gene Family AT3G26400 54.178 5.11e-93 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181486g00009 - - adu:107469131 516.153