Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181486g00008 ATGTCAACTAAGGGTAACATAGGCGCTTGGGCCGCCGATGCTGAGAGGGAGGAGCAGGAGGCTGCTGCCGCTGCAGCAACTACCGGCGCTGCTGGAGTCGCCGGATCGGAGAACTTCCCGAGCCTGAAGGAAGCCGTTTCCGCCAAGCCCAAGAAGAAGAAGATGACGCTCATGGAGTTCACCACTGGGAACTACGCCGGCGGTGGTGCCGGGGGGTTCGCGAGGAAGCAGAGGGGCTTAACGCCGGACGAGATGCTCCGCCTTCCGACGGGGCCTAAGGAACGCTCCGCCGAGGAAATGCAGTACGGCCGCGGGTTCTCTAACTACGGCGGCGGCCGCTCCGGTCCGCCGCCTGGCCGAGGTCCGGACCGCGACGATGGCAACGGTTCCTGGGGCGGAGGAAGGAGATCCTATGGTGAGTTCGATGAAGAGCGCAGGGGTGGTCCCCGTTCTAGGGTTTCGGATTTCGATCAGCCTTCGAGGGCCGACGAGGTGGACAATTGGGCTTCGGTGAAGAAACCGGTTCAGGCATTCGATTCCGGTAGGCAAAATCGGTACGGTTCTGTTGGCGGTGGCAATGTCGACGGCGGTGTTGGTGGTTCTAGAGCGGATGAAGTGGATAATTGGATGGCTGGCAAGAAGCCTCTTCCTTCTAGATCTTCCACATTTGGTTCGGGGTTCCGCGATTCAGTTCCGGAGCCTGATCGCTGGACAAGTGGCAAGCGTGACGTGCGCGATTCACGTGACAGCGATCGGGAGCGGCCGAGATTGGTGCTGGACCGGCCGCAAGGCAATGGTTCCGTGAACGAAACGGAGGCAGTGGTGAAGACGAAGAAGCCGAACCCTTTTGGCGCAGCGAGGCCAAGGGAGGAGGTTTTGGCTGAAAAAGGATTGGATTGGAAGAAGCTCGATTCGGAGATTGAATCGAAGAGGCCCATGAGTGCACACTCCAGTAGGCCCTCCAGTGCCCAGTCGAGTCGCTCCGAGGCGCCTGCGTCAGAGGATTCGGTTAAGCCGAAGGCGAAGGTGAATCCCTTTGGGGATGCCAAGCCTAGGGAGGTTTTGCTGGAGGAGAAGGGAATGGATTGGAAAAAGATTGATCTTGAATTGGAGCATGGCCGTATTGATAGGCCAGAAACAACAGAGGAAAAATTGCTGAAAGAAGAAATTGATAACTTGAAGAAAGAACTTGGGAAAGAGTCGGAAGCAAATTCAAATAAGATTTCTAGTGATGAAGCAGTCCCAACCAATACAGAATCAGTGTTACTCCAGAAAGAAAGGGAGCTGGAAATTCTTACTCGCGATTTGGATAACAAAATTCGTTTTGGGCAAAAAGCCGCTGAAGGTCCAGGCTCTTCAACAAGAAGGGCTGCTGGTTTTCCCGATAGACCACAGCCTTCTCAATCTGGCTCGTTTGAGGATTCTAGAAATGTTGATTCCCCAGACAGACCCCGATCCCGTGGCACAGGAAATATGTGGCCACGTTCTAATGAGGATAGAAGACCATTACGTTCTAACGAGGACAGAAGACCATTTCAAGGTAGCAGGGACAGAGGATGGTTTCAGAATAGCAGAGACTTAGATAGGTCCAGGTCAAAAGAGAGGTGGTGA 1611 0.5462 MSTKGNIGAWAADAEREEQEAAAAAATTGAAGVAGSENFPSLKEAVSAKPKKKKMTLMEFTTGNYAGGGAGGFARKQRGLTPDEMLRLPTGPKERSAEEMQYGRGFSNYGGGRSGPPPGRGPDRDDGNGSWGGGRRSYGEFDEERRGGPRSRVSDFDQPSRADEVDNWASVKKPVQAFDSGRQNRYGSVGGGNVDGGVGGSRADEVDNWMAGKKPLPSRSSTFGSGFRDSVPEPDRWTSGKRDVRDSRDSDRERPRLVLDRPQGNGSVNETEAVVKTKKPNPFGAARPREEVLAEKGLDWKKLDSEIESKRPMSAHSSRPSSAQSSRSEAPASEDSVKPKAKVNPFGDAKPREVLLEEKGMDWKKIDLELEHGRIDRPETTEEKLLKEEIDNLKKELGKESEANSNKISSDEAVPTNTESVLLQKERELEILTRDLDNKIRFGQKAAEGPGSSTRRAAGFPDRPQPSQSGSFEDSRNVDSPDRPRSRGTGNMWPRSNEDRRPLRSNEDRRPFQGSRDRGWFQNSRDLDRSRSKERW 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181486g00008 536 MobiDBLite consensus disorder prediction 497 536 - -
Stsc181486g00008 536 Coils Coil 383 403 - -
Stsc181486g00008 536 MobiDBLite consensus disorder prediction 407 421 - -
Stsc181486g00008 536 MobiDBLite consensus disorder prediction 314 332 - -
Stsc181486g00008 536 MobiDBLite consensus disorder prediction 434 536 - -
Stsc181486g00008 536 MobiDBLite consensus disorder prediction 1 39 - -
Stsc181486g00008 536 MobiDBLite consensus disorder prediction 63 353 - -
Stsc181486g00008 536 MobiDBLite consensus disorder prediction 137 168 - -
Stsc181486g00008 536 MobiDBLite consensus disorder prediction 283 313 - -
Stsc181486g00008 536 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 533 IPR010433 GO:0003743
Stsc181486g00008 536 Pfam Plant specific eukaryotic initiation factor 4B 4 519 IPR010433 GO:0003743
Stsc181486g00008 536 MobiDBLite consensus disorder prediction 234 259 - -
Stsc181486g00008 536 MobiDBLite consensus disorder prediction 396 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181486g00008 Stsc-Chr181486 59064 63029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181486g00008 38 536 Eukaryotic Initiation Factors Gene Family AT3G26400 51.124 2.16e-132 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181486g00008 - - pcin:129309104 562.377