Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181486g00004 ATGGGAGTTTTCACTTTCGTACTGCGCAAATCCGGCGGAGAATGGTCGGCCAAGCAACATAACGGTGACATCGAGGAGTCATCTTCTGACACCTTCGAAATCCAACGGAAGCTCGTTAAGGCCGTCTGCGCCGTCGATTCTTCTGGCGCCGTTCAATCCTCTTTCTCCATAGTTACCCCTTCCTCCGCCGTTTTCCAGGTGGTTGTGGGTGGTGCGGTGTTTGTTGGTGGTGCGGTGGCTGCTGCTCCTGCAGGAGGAGCTGCCCCAGCTGCTGAGGCCGCCCCAGCTGCAGATAAGAAGGAAGAAAAGGTTGAGGAAGAAGAAGATGAAGATTTTGGAATGTCACTTTTTGATTAG 357 0.5322 MGVFTFVLRKSGGEWSAKQHNGDIEESSSDTFEIQRKLVKAVCAVDSSGAVQSSFSIVTPSSAVFQVVVGGAVFVGGAVAAAPAGGAAPAAEAAPAADKKEEKVEEEEDEDFGMSLFD 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181486g00004 118 MobiDBLite consensus disorder prediction 86 118 - -
Stsc181486g00004 118 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 118 IPR044252 GO:0003735|GO:0005840
Stsc181486g00004 118 MobiDBLite consensus disorder prediction 103 118 - -
Stsc181486g00004 118 Pfam 60s Acidic ribosomal protein 69 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181486g00004 Stsc-Chr181486 15003 16637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181486g00004 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 65.217 3.59e-28 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181486g00004 K02942 - gmx:100804776 107.071