Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181484g00010 ATGAATCACTCTTCAGTTGATCATGACCGGGATCAGTGTATGAAGAAGCGAAAATCGGGTGCTGAAGCCTCATCAAGCATGAGGAAATCCAGCTCAAAGAGAAGATTCAGCAGCAGCAACAAGAACAACGATGACGGTGAGAGAAGCAGTAACAAAGGAGATGGAGGAGGAGGCGTGTCAACTACGCTGAAGCTGTACGAAGATCCATGGAAAATCAAGAAAACCTTAACTGACAGCGACCTTGGGATCCTGAGCAGGCTGTTGCTGGCAGCTGATTTGGTGAAGAAACAGATCCTTCCGATGCTGGGAGGCGATCAAGCTCGAGCGGCGGAAACTGAAGAAGGAACTCCAGTGAGAGTATGGGATATGGACACTCGATCCATGCACCAGTTGGTCCTGAAGCGTTGGTCATCTTCCAAAAGTTATGTTCTTATCGGAAAATGGAATCAAGATTTCGTGCGAAGAAGGGAGCTCAAGAAAGGTGATGAGATTGGCTTTCACTGGGATCCATATAACTGCGCCTTCAACTTTTGCGTTCTTACACGCGCCTCCGCCACCACCACCACCAACTACTGA 576 0.4844 MNHSSVDHDRDQCMKKRKSGAEASSSMRKSSSKRRFSSSNKNNDDGERSSNKGDGGGGVSTTLKLYEDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGGDQARAAETEEGTPVRVWDMDTRSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFHWDPYNCAFNFCVLTRASATTTTNY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181484g00010 191 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 30 184 - -
Stsc181484g00010 191 MobiDBLite consensus disorder prediction 1 23 - -
Stsc181484g00010 191 SUPERFAMILY DNA-binding pseudobarrel domain 69 179 IPR015300 -
Stsc181484g00010 191 MobiDBLite consensus disorder prediction 1 60 - -
Stsc181484g00010 191 Gene3D - 69 188 IPR015300 -
Stsc181484g00010 191 CDD B3_DNA 70 180 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181484g00010 Stsc-Chr181484 43131 43706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181484g00010 72 167 RAV Transcription Factor Family AT1G50680 35.922 2.70e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181484g00010 - - gmx:102667341 261.536