Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181480g00006 ATGAGCAGTAGCAACAAGATATTGCCATTATTGGGAATGGTGATGGCTATGCTGTTGCAAAGTGGTAGCATGGTTGTTATAAAAGCAGCCATGAATGAGGAGATGAACAAATATGTCTTGGTTGTTTATTCTTTGGCACTCTCGACTCTCCTCCTTCTCCCCTTTCCCTTCCTTCTTCCCAGAAGTTTAGGACAGATATTTGCTTATGTCGGCATAGATCTTAGCTCACCAACTCTTGCCTCTGCCATGCTCAACCTTATTCCAGCTTTAACTTTTGTGCTTGCTCTCTTATTCAGGATGGAAAAAGTTTATTGGGGACACTTTAGCATCCATGCTAAAGTCATAGGAACTGTGGTATCCATGGGTGGAGCCTTTGTTGTGATATTATATAAGGGTCCACCAATCTTCAAGGCACACTTCTCTTCACTCACCACATTCTCATCATTTTCATCCTCACAACAATTCAATTGGATCTTGGGAGGCTTTTTCTGTGTTGCTGATTCTTTCGTATCTTCACTCTGGTATATATATCAGGCATCAGTAATAAGGAAATACCCTGCAGTAATGGTGACAGTGTTCTTCCAAGTATTATTTTCAACCATTCAATGCTCAATATTTGCATTTATTGCAGTTAGAGAGCAAAGTGCATGGCAGCTGAAGCTAGACAGAGGGTTGATTGCAATATTTTACCAGGCAATAGCTGCAACAGCGTTACGATACCTGTTATGCACTTGGTGCGTGCAAAGAGCTGGACCATTTTTCTGTTCAATGTTCAAACCTATTTCAATCATCTTCACTGTTATCATGGGTGCTCTGTTTCTTGGAGATGATTTTTACCTTGGAAGCTTGATTGGTACAGTTATAATCGTAATAGGATTTTATGCTGTAATGTGGGGAAAGGCCACAGAAGAAAAAGGTGTCATAACTGATGAAGAGAGGTTGGAATCAACGTGCCATAATGTTCCTCTCTTGCATGACAAAGATGTTACAATATAA 996 0.4026 MSSSNKILPLLGMVMAMLLQSGSMVVIKAAMNEEMNKYVLVVYSLALSTLLLLPFPFLLPRSLGQIFAYVGIDLSSPTLASAMLNLIPALTFVLALLFRMEKVYWGHFSIHAKVIGTVVSMGGAFVVILYKGPPIFKAHFSSLTTFSSFSSSQQFNWILGGFFCVADSFVSSLWYIYQASVIRKYPAVMVTVFFQVLFSTIQCSIFAFIAVREQSAWQLKLDRGLIAIFYQAIAATALRYLLCTWCVQRAGPFFCSMFKPISIIFTVIMGALFLGDDFYLGSLIGTVIIVIGFYAVMWGKATEEKGVITDEERLESTCHNVPLLHDKDVTI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181480g00006 331 PANTHER WAT1-RELATED PROTEIN 9 310 IPR030184 GO:0016020|GO:0022857
Stsc181480g00006 331 SUPERFAMILY Multidrug resistance efflux transporter EmrE 207 301 - -
Stsc181480g00006 331 Pfam EamA-like transporter family 160 297 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181480g00006 Stsc-Chr181480 62208 66928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181480g00006 4 312 Nodulin-like Gene Family AT5G40240 38.279 5.13e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181480g00006 - - tpra:123906754 414.846