Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181480g00002 ATGGAAGAGGCAACATGTTCATTCAGTGATGACAATCTGCTAGGAAAAGGAGGATTTGGCAAAGTGTACCGCGGCATTTTACGGTCAGGAGAGGTCGTAGCAATCAAGAAGATGGCGCTGCCGGCAATCAAAGAAGCAGAGGGGGAACGTGAGTTCCGTGTGGAAGTGGACATCTTGAGCAGACTCGACCACCCAAATCTTGTTTCTCTGATAGGGTACTGTGCTGATGGAAAACATAGATTCCTAGTATATGAATACATGCATAATGGAAACCTGCAAGATCATTTGAATGGCATTGGTGAAAGAAAAATGGATTGGCCCCTAAGACTCAAAGTGGCACTAGGAGCTGCAAAAGGCCTTGCTTATCTCCACTCAAGTTCTGATGTTGGAATTCCCATTGTTCATAGAGATTTCAAATCAACCAATATTCTCTTAGATGCCAACTTTGATGCAAAGATATCTGACTTTGGGCTTGCCAAGTTAATGCCGGAAGGACAAGAGACACATGTGACGGCAAGAGTTCTTGGCACCTTTGGCTACTTTGATCCTGAGTATACATCGACTGGGAAACTTACTCTGCAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTCTGGAGCTTTTGACTGGACGCAGAGCAGTTGATCTAAACCAAGGTCCTAATGATCAGAACCTTGTACTACAGGTGAGACATATTCTTAATGATCGAAAGAAGCTGCGTAAGGTCATAGATCCAGAGATGGCCCGAAATTCTTACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTCCGAACTGATAGTAATGAGAGACCTTCAATGGCGGAATGCGTACAGGAACTCCTAATGATTATCTATACAAATTCAAAAGGTTTGGGAATGGTTATGCATAGTTTGAGATTGATCTAG 921 0.4289 MEEATCSFSDDNLLGKGGFGKVYRGILRSGEVVAIKKMALPAIKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGERKMDWPLRLKVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDANFDAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTDSNERPSMAECVQELLMIIYTNSKGLGMVMHSLRLI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181480g00002 306 SUPERFAMILY Protein kinase-like (PK-like) 4 292 IPR011009 -
Stsc181480g00002 306 CDD STKc_IRAK 14 285 - -
Stsc181480g00002 306 FunFam receptor-like serine/threonine-protein kinase NCRK 87 297 - -
Stsc181480g00002 306 Pfam Protein kinase domain 9 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181480g00002 306 Gene3D Transferase(Phosphotransferase) domain 1 87 296 - -
Stsc181480g00002 306 PANTHER OS01G0750732 PROTEIN 1 288 - -
Stsc181480g00002 306 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Stsc181480g00002 306 PIRSF ILK 2 296 - -
Stsc181480g00002 306 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Stsc181480g00002 306 FunFam serine/threonine-protein kinase PBS1-like 1 86 - -
Stsc181480g00002 306 ProSiteProfiles Protein kinase domain profile. 8 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181480g00002 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181480g00002 Stsc-Chr181480 25232 28739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181480g00002 1 289 Receptor kinase-like Gene Family AT3G58690 47.959 2.02e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Stsc181480g00002 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181480g00002 - - gmx:100796654 578.556