Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181480g00001 ATGGCTGCAACACTGTCACTCTCCCTCTCCATAGACCCCCAAACCCACCACCGATTCCCCTTCCCCAAACACCACACGCGCCCTTTCTCACACCCACACCTCAATTTCCAAATTTACCCTTCACACTCCTTCAAAATCTCATCCTCCACCCCTTCCCATTCCCATTCTCACTCCTCAACAACATCACCACCACCACCACCACAACCGCCAGTCTCCTCTCTCTACCTCGACGACCCCTTCCGCACAGGTCGCTTCCTCACCAACGACGAGCTCGACCGCCTCCGTTTCCTCGAATCCTTCGTCTACTCCGAGAACCTCAAATCCGGCTCCATGTGGGTCCGCGTCATGCGCCCCGACGAGACCGACACCACCGTCGCTCTCCTCGCCGATTCCTTCGCCGAGTCGATGATGCTTCCCGCGGGCTACGCCGGCCTGCTCAGGTTCCTCATCAAGAAGTACCTTCTCGAGAGGAGAACCCTCATGCCTCACATGGCCACGCTCCTTGGATTCTACCGAGAAAATGCTACTACTAATCAAGAAGAACAAGAAGTTAAATTCGCCGGAACTGTGGAGGTTTGTTTTGACCAAAGGGGTGCCAACACTTCGATCCCTTCGCCGCTTCCTCCGAGGAACTCGCCTTATATATGCAACATGGCGGTTCACAAGTCCCTTCGGAGGAGAGGCATTGGGTGGCATCTGCTGAACGCAAGTGAGGAACTAATTTCTAAGATGAGTTCTTCAAGAGAGGTTTACTTGCATTGCAGAATGATTGATGAAGCTCCATTTAGCATGTATGAAAAAGCAAATTACAAAGTTGTAAAAACAGATAGTATTTTAGTCCTGTTGATGTTGCAGAGACGAAAGCACTTGATGTGCAAGAAACTACCTCTGTCGAATACACCTTCAGAAACAGATCTGTCTGGTTCAGATGAGTAA 936 0.5096 MAATLSLSLSIDPQTHHRFPFPKHHTRPFSHPHLNFQIYPSHSFKISSSTPSHSHSHSSTTSPPPPPQPPVSSLYLDDPFRTGRFLTNDELDRLRFLESFVYSENLKSGSMWVRVMRPDETDTTVALLADSFAESMMLPAGYAGLLRFLIKKYLLERRTLMPHMATLLGFYRENATTNQEEQEVKFAGTVEVCFDQRGANTSIPSPLPPRNSPYICNMAVHKSLRRRGIGWHLLNASEELISKMSSSREVYLHCRMIDEAPFSMYEKANYKVVKTDSILVLLMLQRRKHLMCKKLPLSNTPSETDLSGSDE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181480g00001 311 Pfam Acetyltransferase (GNAT) family 186 269 IPR000182 GO:0016747
Stsc181480g00001 311 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 111 280 IPR016181 -
Stsc181480g00001 311 MobiDBLite consensus disorder prediction 45 59 - -
Stsc181480g00001 311 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 310 - -
Stsc181480g00001 311 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 111 288 IPR000182 GO:0016747
Stsc181480g00001 311 Gene3D - 162 304 - -
Stsc181480g00001 311 CDD NAT_SF 208 253 - -
Stsc181480g00001 311 MobiDBLite consensus disorder prediction 45 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181480g00001 Stsc-Chr181480 21997 25611 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc181480g00001 Acetyltransf_1 1e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181480g00001 - - qsu:112018570 366.311