Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181477g00009 ATGCATGAGAAGAGTGTGCCTTCGCCGCTCATGAACACGACCTCATCAAAGGTAATGTTTTCTATGTCGGAGGTGAAGAGGCACAATACAGCTGATTCTGCTTGGATCATTGTCCACGATCACGTCTACGACTGCACCAAGTTCCTGAAGGACCACCCTGGAGGCCCTGAAAGTATCCTTATCAATGCCGGCTCCGATTGCACCAAGGAGTTTGATGCCATTCATTCCAACAAGGCTAAGGAGTTGCTTCAAGATTTCCGAATTGGCCAACTCATTACCATAGTAGGTATTGAGGAAGAAGAGACACCATTTTTACAAGCAGCAAGAAATGGCATAGTTGAAATGGTGGTGAAGATTCGAAGTGCGATACCAAGTGTGATCCACAACAGCAACTCAAGGAAGGAAAACGTGGTGTTGGTGGCAGTGAAACACAGACAACCGCATGTTGTGGAGGCACTAAAAAGAGAACTAAAAGATGAAGTTTGGAATAACTTGATTCAGGCAGTGGATGATGATGACAACACAGTGTTGCACTTAGCAGCACAAACACTAGTAGGGAACAAGCCTTGGCATGTCGCTGGCACTGCCTTGCAAATGATGTGGGATATCAAGTGGTATCAGTATATTAAGAGCCTTGTACCGCAACGTTGCTACTTCAGAAGCAACAGAGGGTCAAAGACAGCCTGGGAAATCTTTGAGACATCACACGAGAGTCTTGTTGAAAACGGCAGCGAGTGGCTGAAGGAAACATCGCATGCTTGTTCCGTGGTGGCGGCACTTGTTGCGGGTGTCTCCTTCGCCACAGCCAGCCAAGTCCCCGGCGGCACCAACGACAAAGGCAAGCCAGAACTAGAAGGCCAACCAGCGTTCCACGCATTCGCCATCGCTTCCCTCATCGGGCTTTGCTTCTCTGTGACAGGACTCATAATGTTCCTGTCCATCCTCACATCTCGAAAAGAAGCGAAAGATTTTCGAAGGGCATTGCCACTGAAACTGCTTCTAGGGTTGAGTTCCCTCTTCGCGTCTATTGTGGCCATGTTTGTATCGTTTTGCTCCGGTCATTTCTTCATCATAAGTCGCAAGTATGAGACTTTCCTCTTCTCCTTCTATGCAGCTACTTCCATTCCTGTTGCTATCTATGCCTTGGGACAGTTTCCGCTATACTTTGATCTTCTCATTACTATTATCACTAAGGTCCCATGGGCAAGTAATAAAGGTAACAATTTCTAA 1230 0.4699 MHEKSVPSPLMNTTSSKVMFSMSEVKRHNTADSAWIIVHDHVYDCTKFLKDHPGGPESILINAGSDCTKEFDAIHSNKAKELLQDFRIGQLITIVGIEEEETPFLQAARNGIVEMVVKIRSAIPSVIHNSNSRKENVVLVAVKHRQPHVVEALKRELKDEVWNNLIQAVDDDDNTVLHLAAQTLVGNKPWHVAGTALQMMWDIKWYQYIKSLVPQRCYFRSNRGSKTAWEIFETSHESLVENGSEWLKETSHACSVVAALVAGVSFATASQVPGGTNDKGKPELEGQPAFHAFAIASLIGLCFSVTGLIMFLSILTSRKEAKDFRRALPLKLLLGLSSLFASIVAMFVSFCSGHFFIISRKYETFLFSFYAATSIPVAIYALGQFPLYFDLLITIITKVPWASNKGNNF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181477g00009 409 Pfam Cytochrome b5-like Heme/Steroid binding domain 22 91 IPR001199 -
Stsc181477g00009 409 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 48 55 IPR018506 GO:0020037
Stsc181477g00009 409 PANTHER CASKIN 59 394 - -
Stsc181477g00009 409 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 17 92 IPR001199 -
Stsc181477g00009 409 PRINTS Cytochrome B5 signature 79 91 IPR001199 -
Stsc181477g00009 409 PRINTS Cytochrome B5 signature 42 52 IPR001199 -
Stsc181477g00009 409 PRINTS Cytochrome B5 signature 67 74 IPR001199 -
Stsc181477g00009 409 PRINTS Cytochrome B5 signature 52 66 IPR001199 -
Stsc181477g00009 409 FunFam Sulfite oxidase, mitochondrial 15 94 - -
Stsc181477g00009 409 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 15 92 IPR036400 -
Stsc181477g00009 409 Gene3D - 94 203 IPR036770 -
Stsc181477g00009 409 SMART Cyt_b5_2 20 92 IPR001199 -
Stsc181477g00009 409 Gene3D - 14 93 IPR036400 -
Stsc181477g00009 409 Pfam Domain of unknown function 245 356 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181477g00009 Stsc-Chr181477 53893 56489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181477g00009 19 93 NADPH P450 reductases AT5G48810 46.053 2.55e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181477g00009 - - aip:107606717 523.472