Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181470g00003 ATGGCTTCGAGAGTCAAAGGGAGTGTGAGTTTAGAGGGACACAAAGTCATTCTTGTTCCGTACATGGAGTCTCACGTTCCCAAGTATCACTCATGGATGCAAGACCCTTCTCTTCTTCAAGCTACTGGCTCGGAGCCTCTTTCCCTTGATCAAGAGTATCAGATGCAACTTTCTTGGTCACAAGACCTTAACAAGGAGACGTTTATTGTACTCGATAAAGATTTGGTTGTTGGAGATTTCTCTCATGGCGAACCGCATGTTGAAGCCATGGTTGGTGATGTAAATATCTTCATGAATGACTTGGATAATCCTCACATGGCAGAGATTGAAATAATGATTGCTGAACCAAAATGCCGTGGAAAAGGACTTGGAAAGGAGTCTGTTCTGTTGATGATGGCCTTTTCTATTGAGAGCTTGGGGATCAACGTCTTTGGTGTCAAAATTGGAGAATCAAATGAAGCATCCCTTAACCTGTTCAAAAAATTGGGTTTTGTGCAGACTTCATATAGCAATATCTTCCGTGAGGTAACTTTGGAGTGGAAAGTATCAGAGCTCAAGAATGAAGAGATGATGGTTGGTTTGTCGGCTACTATGATTAAACATACATAA 609 0.4154 MASRVKGSVSLEGHKVILVPYMESHVPKYHSWMQDPSLLQATGSEPLSLDQEYQMQLSWSQDLNKETFIVLDKDLVVGDFSHGEPHVEAMVGDVNIFMNDLDNPHMAEIEIMIAEPKCRGKGLGKESVLLMMAFSIESLGINVFGVKIGESNEASLNLFKKLGFVQTSYSNIFREVTLEWKVSELKNEEMMVGLSATMIKHT 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181470g00003 202 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 4 171 - -
Stsc181470g00003 202 Gene3D - 5 173 - -
Stsc181470g00003 202 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 167 IPR016181 -
Stsc181470g00003 202 PANTHER N-ACETYLTRANSFERASE 9 5 191 IPR039135 GO:0008080
Stsc181470g00003 202 Pfam Acetyltransferase (GNAT) domain 16 165 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181470g00003 Stsc-Chr181470 44474 48934 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc181470g00003 Acetyltransf_3 1.6e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181470g00003 K25762 - gmx:100817900 315.464