Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181469g00011 ATGAATGCTATGGGCATTTGTCTGATGAAACGGCAATGGCCATGGCTTCTTTGTGTTCTGCTGCTACACATTACAATGACAAAATACGAAGCAATTAGTCCTGATGGAGAGGTTCTTATCAACTTCAGGATGGCGGTTGCTAGCTCAGATGGTGTCTTGTTACAATGGAGACCTGAGGATCCTGATCCATGTAAATGGAATGGAGTGAAATGTGATCCCAAGACCAAAAGTGTTACACATCTGTATCTATCTCGGCATAAGTTGAGTGGGTCCATATCTCCTGACCTTGGGAAGCTAGAGCATTTAAGGGTTCTTGCTCTTCACAGCAACAACTTCTATGGGACAATACCATCAGAATTGGCAAACTGCACTGAATTGCAGGGAATCTTCTTACAGGGTAATTACCTTAGTGGAGTAATTCCAAGTGAAATAGGAAATCTCTCACAGCTCCAAAATTTGGACATATCAAGCAACTCGCTTAGTGGGAATATCCCAGCATCACTTGGGAGGTTGTATAATCTCAAATATTTTAATGTATCTACCAATTTTCTGGTTGGACCAATACCTGCTGATGGTGTCCTTGCCAATTTTACTGGAAGCTCCTTTGTTGGAAATCGTGGTTTGTGTGGGGTTCAACTCAATTCAACATGTAAAGCTGATGGTTCGCCTGGGACAAATATTCAATCTAATTCTTCAGACCAAAATCAAAATGGAAAGAAGAAATATTCTGGAAGGCTGCTCATCAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAGAAATTTGGCAAAACTGACAAAATAAGTCTTGCAATGGATGTCAGTGGAGGTGCGTCAATTGTAATGTTCCATGGCGATCTACCATATTCTTCAAAAGACATTATTAAGAAACTTGAAACTTTAAATGAGGAACACATAATAGGGATAGGGGGGTTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATTGTAAAATTGAATGAGGGCTTTGACCGGTTTTTTGAGAGGGAGCTTCAAATTCTTGGTAGCATCAAACACCGTCATCTAGTGAATTTACGAGGATATTGCAATTCACCTACATCAAAGTTATTAATATACGACTACCTACCTGGTGGCAGTCTTGATGAAGCTCTTCATGAAAGATCCGAGCAACTAGACTGGGATTCACGGTTGAATATAATTTTGGGAGCTGCAAAAGGGCTTGCATACTTGCATCATGATTGTTCACCTAGGATCATACATCGAGACATAAAATCAAGTAACATTTTGCTTGATGGAAACTTGGAGGCCCGAGTCTCTGATTTTGGACTGGCCAAACTTTTGGAGGATGAAGAATCTCACATCACCACAATTGTTGCTGGAACATTTGGTTATCTAGCTCCTGAGTACATGCAAAGTGGTAGAGCAACTGAGAAGACTGATGTCTATAGTTTTGGTGTGCTGACACTTGAAGTGATAAGTGGAAATCGGCCAACAGATGCATCATTCATTGAAAAGGGTCTCAACATTGTTGGCTGGCTGAATTTTCTCATTACTGAAAATAGGCCGAGGGATATAGTTGATCCTCTTTGCGAAGGGATACAGGTTGAGAGCCTTGATGCCTTGCTCTCTGTGGCTATTCAATGTGTTTCGTCAAGTCCAGAGGATCGACCAACGATGCACCGGATTGTACAGTTGCTTGAATCAGAGGTCTTGACTCCATGCCCAAGTGATTTCTATGACTCCGAGTAG 1791 0.4143 MNAMGICLMKRQWPWLLCVLLLHITMTKYEAISPDGEVLINFRMAVASSDGVLLQWRPEDPDPCKWNGVKCDPKTKSVTHLYLSRHKLSGSISPDLGKLEHLRVLALHSNNFYGTIPSELANCTELQGIFLQGNYLSGVIPSEIGNLSQLQNLDISSNSLSGNIPASLGRLYNLKYFNVSTNFLVGPIPADGVLANFTGSSFVGNRGLCGVQLNSTCKADGSPGTNIQSNSSDQNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKTDKISLAMDVSGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELQILGSIKHRHLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERSEQLDWDSRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVISGNRPTDASFIEKGLNIVGWLNFLITENRPRDIVDPLCEGIQVESLDALLSVAIQCVSSSPEDRPTMHRIVQLLESEVLTPCPSDFYDSE 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181469g00011 596 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 32 194 - -
Stsc181469g00011 596 SUPERFAMILY Protein kinase-like (PK-like) 296 580 IPR011009 -
Stsc181469g00011 596 Gene3D Ribonuclease Inhibitor 33 218 IPR032675 -
Stsc181469g00011 596 SUPERFAMILY L domain-like 34 199 - -
Stsc181469g00011 596 SMART serkin_6 313 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181469g00011 596 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Stsc181469g00011 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Stsc181469g00011 596 ProSitePatterns Protein kinases ATP-binding region signature. 319 345 IPR017441 GO:0005524
Stsc181469g00011 596 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 287 388 - -
Stsc181469g00011 596 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 389 591 - -
Stsc181469g00011 596 Gene3D Phosphorylase Kinase; domain 1 286 388 - -
Stsc181469g00011 596 ProSiteProfiles Protein kinase domain profile. 313 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181469g00011 596 Pfam Protein kinase domain 315 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181469g00011 596 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 76 581 - -
Stsc181469g00011 596 Gene3D Transferase(Phosphotransferase) domain 1 389 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181469g00011 Stsc-Chr181469 53323 60679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181469g00011 4 589 Receptor kinase-like Gene Family AT2G35620 74.232 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Stsc181469g00011 Pkinase 8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181469g00011 - - gmx:100819230 1078.93