Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181469g00009 ATGACGCGAGGGAAGCAGAAGATCGAAGCTCAGAAGCGCAACGCCGACAAGAATCAGAAGGCTAAGGGCTCTCAGCTTGAGGCCAGAGCCGTTGGCCTCAAAGTCGTTTGCCCTATCTGCAAGACCCAGCTTGCAAATCAAAACCAGCTTGTTGATCATTATGGCTCCAAACACCCAAAGGAGAAACCTCCCGAGTCAAGCTAA 204 0.5147 MTRGKQKIEAQKRNADKNQKAKGSQLEARAVGLKVVCPICKTQLANQNQLVDHYGSKHPKEKPPESS 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181469g00009 67 Gene3D - 1 66 IPR026939 -
Stsc181469g00009 67 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 63 IPR013087 -
Stsc181469g00009 67 Pfam Zinc-finger of C2H2 type 37 57 - -
Stsc181469g00009 67 SUPERFAMILY Expressed protein At2g23090/F21P24.15 1 65 - -
Stsc181469g00009 67 ProSitePatterns Zinc finger C2H2 type domain signature. 37 58 IPR013087 -
Stsc181469g00009 67 MobiDBLite consensus disorder prediction 1 23 - -
Stsc181469g00009 67 PANTHER GEO09665P1-RELATED 1 65 IPR045230 -
Stsc181469g00009 67 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181469g00009 Stsc-Chr181469 47446 50216 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc181469g00009 zf-met 0.00017 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181469g00009 - - sind:105158818 128.257