Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181469g00008 ATGTTCAGTGGCGAGGACGCCCGAGCAGCTCGCCTCGGCATGCTGGCGCCGCCGCAGCCGCAGATGTTGAATCCGGCGACATCGTCGGTGATTTCCGGCGAGATATCGCCGACGACGGCGGGGAGAGAGGAGAGGGCTCTGGCGCAGCCGCAGTGGAGCCAGCAGGAAACGAGGGAGTTCATAGCGATACGCGCGGAGCTTGAGAGGGACTTCACTGCGTCGAAGCGGAACAAGACGCTTTGGGAGGTTGTGAGCTCCAAGATGAGGGAGAGAGGGTTCAGGAGGAGCCCCGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCGGAGCATAGCAGGCAATGCCCATTTTTTGAAGAATTGCATGCAGTATTTACTGAAAGAGCGCGAAATATGCAACGATTGCTTCTAGAAACGGAGGCTCGTTCAGCGCAAACGAAGAAAGGGGTGAAAAGGTCAAGTGGAGAAAGGTCCTCAGAAGAATACTCTGAAGATGATGAGGAGGTAGAAGATGACAGTGAAGAGGAGAGGCCTTCTAGAAGCAATGCTCGTAAAAGGAAAGTTGACAAAAGCGACAAGTCTTCAAAGGCAAACAATCCGTCAAATACTGCTAGTAGTATTCAGGATATGCTCAATGAATTTTTCCAGCAACAGCTAAGGATGGAGATGCAATGGAGGGAAATGATGGATAGGCGTGCCCAAGAAAGACAGCTTTTTGAGCAGGAATGGAGGCACACAATGGAGAAACTTGAGCGGGAGAGATTAATGATTGAACAGACATGGAGGGAGAGGGAAGAACAGAGGAGAATCAGGGAAGAGAGCCGGGCAGAGAGGAGGGATGCTTTGTTGACAACTCTTTTGAACAAACTCATACATGAATCTAACTAA 918 0.5033 MFSGEDARAARLGMLAPPQPQMLNPATSSVISGEISPTTAGREERALAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHSRQCPFFEELHAVFTERARNMQRLLLETEARSAQTKKGVKRSSGERSSEEYSEDDEEVEDDSEEERPSRSNARKRKVDKSDKSSKANNPSNTASSIQDMLNEFFQQQLRMEMQWREMMDRRAQERQLFEQEWRHTMEKLERERLMIEQTWREREEQRRIREESRAERRDALLTTLLNKLIHESN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181469g00008 305 Pfam Myb/SANT-like DNA-binding domain 50 133 IPR044822 -
Stsc181469g00008 305 MobiDBLite consensus disorder prediction 170 184 - -
Stsc181469g00008 305 Gene3D - 52 113 - -
Stsc181469g00008 305 MobiDBLite consensus disorder prediction 185 204 - -
Stsc181469g00008 305 FunFam Zinc finger and SCAN domain-containing 20 52 113 - -
Stsc181469g00008 305 MobiDBLite consensus disorder prediction 1 51 - -
Stsc181469g00008 305 MobiDBLite consensus disorder prediction 21 36 - -
Stsc181469g00008 305 MobiDBLite consensus disorder prediction 150 217 - -
Stsc181469g00008 305 CDD GT1 50 115 - -
Stsc181469g00008 305 PANTHER FI21293P1 41 302 - -
Stsc181469g00008 305 MobiDBLite consensus disorder prediction 154 169 - -
Stsc181469g00008 305 ProSiteProfiles Myb-like domain profile. 44 108 IPR001005 -
Stsc181469g00008 305 SMART sant 48 110 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181469g00008 Stsc-Chr181469 45370 47215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181469g00008 50 305 Trihelix Transcription Factor Family AT2G38250 44.361 6.88e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc181469g00008 Myb_DNA-bind_4 5.4e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181469g00008 - - gmx:100812635 402.519