Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181467g00001 ATGGACGCTGGAGGACACTACAACCCTCGCACCGTTGAGGAAGTTTTCCGCGACTTCAAGGGTCGCAGAGCTGCTATGATCAAAGCTCTCACCACTGATGTTGAGGAGTTTTACCGGCAGTGTGATCCAGATAAGGAGAACCTCTGTCTGTATGGATACCCCACTGAACAGTGGGAAGTTAATTTACCAGCTGAAGAAGTTCCTCCTGAACTTCCTGAGCCTGCATTGGGCATTAACTTCGCTAGGGATGGGATGCAAGAGAAGGACTGGCTAACTTTGGTTGCAGTTCACAGCGATGCCTGGCTTATTTCAGTGGCTTTTTACTTTGGTGCAAGATTTGGTTTTGACAGAGCTGACAGGAAACGTCTGTTCACTATGATTAATGATCTGCCAACAATTTTTGAGGTTGTGACTGGAACCGCAAAGAAACAGGCGAAGGAAAAGTCATCAGTTTCGAACCACTCCAACAGCAAATCAAAGTCTAGTTCAAAAGGGATTTGCCAGGGAGGGCGACGGAGGCGACGTAGAGAAACTGGGAGGGAATATGCACATAATTTTAGAGTAGTCTCAAATTCAAAAAGGTATGCATTCATGCAGAGTTTCTCCAAAATCATTGATTATAAAATTCTTGGTAATCTACCGAAAGTGCAAATCAAAGATTCATACGTACAAAAAAACTGA 681 0.442 MDAGGHYNPRTVEEVFRDFKGRRAAMIKALTTDVEEFYRQCDPDKENLCLYGYPTEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLTLVAVHSDAWLISVAFYFGARFGFDRADRKRLFTMINDLPTIFEVVTGTAKKQAKEKSSVSNHSNSKSKSSSKGICQGGRRRRRRETGREYAHNFRVVSNSKRYAFMQSFSKIIDYKILGNLPKVQIKDSYVQKN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181467g00001 226 MobiDBLite consensus disorder prediction 145 179 - -
Stsc181467g00001 226 PANTHER CPG BINDING PROTEIN 8 174 IPR045104 GO:0006355|GO:0042393
Stsc181467g00001 226 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Stsc181467g00001 226 MobiDBLite consensus disorder prediction 145 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181467g00001 Stsc-Chr181467 29675 33566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181467g00001 1 166 Alfin-like Transcription Factor Family AT5G20510 74.850 6.63e-85 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181467g00001 K26274 - qsu:112023497 291.967