Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181466g00005 ATGTTCCTATCATCATCAAGAAAATCCATATCCATATCCATCACCATTATCCTCCTCCTCCTCAATCAAACAACAACAACATTGGTCTCATCAAAATGCACTTGTGATGACAATTCACAAGCTAGTAGTAACAACAACAACAACAACGTTTCTGAGGCACTAAAGTACAAATTAATAGCCATGGCAACAACACTAGTTGCTAGCATAATTGGTGTGTGCCTTCCAATCATGGCAAAGAACTACAGATACCTTAACCCAGAGAATGACTTGTACTTCTTGGTGAAATCATTTGCTGCCGGTGTGATATTAGCAACAGGGTTCATCCACATTCTTCATGATGCATTTGAGAATTTAACAAGCCCTTGTATTAGTGAGAAGCCATGGGGATTGTTCCCATTCTCTGGGTTTGTGGCAATGGTTGCAGCAATTGGGACACTCATCATGGAAGCTTTGGTTACTGGGTACCATAAAAGGACTGAATTGATCAAAGCTCAGCCTCTGGAAGATGAGGATGAAGGAGTTAATCATCATCATAATAACGGATTAGATTCACCGGATCATCTTCGGAATACTATAGTTTCTCAGATTTTGGAGTTAGCAATTGTTGCGCATTCAATCATTGTTGGGGTGTCTCTTGGGGTGTCCCAAAGTCCTAACACAATCAAGCCTCTGGTAGCTGCATTGAGTTTTCATCAATGCTTTGAAGGCATGGGACTTGGTGCCTGCATTTCCCAGGCACAATTTAAATACCATACCGTTGTGATTATGGTACTATTCTTTTGCCTAACAATTCCAACTGGAATTGGGGTTGGAATTGGCATATCAAAAATCTACAATGAAGGAAGTCCAAAGGCTTTAATAGTTGAAGGGCTTCTGCTATCAGCATCAGCAGGGATTCTAATTTACATGGCACTTGTTGATCTTCTTGCCTCTGACTTCATGAACCCAAAAATGCTGAGGAGTCTTAGGCTCCAACTTGCTGCAATTCTTGCACTTCTTGTGGGAGTCACTTGTATGTCACTCTTGGTATTGTGGGAAGGAGCATAG 1047 0.4126 MFLSSSRKSISISITIILLLLNQTTTTLVSSKCTCDDNSQASSNNNNNNVSEALKYKLIAMATTLVASIIGVCLPIMAKNYRYLNPENDLYFLVKSFAAGVILATGFIHILHDAFENLTSPCISEKPWGLFPFSGFVAMVAAIGTLIMEALVTGYHKRTELIKAQPLEDEDEGVNHHHNNGLDSPDHLRNTIVSQILELAIVAHSIIVGVSLGVSQSPNTIKPLVAALSFHQCFEGMGLGACISQAQFKYHTVVIMVLFFCLTIPTGIGVGIGISKIYNEGSPKALIVEGLLLSASAGILIYMALVDLLASDFMNPKMLRSLRLQLAAILALLVGVTCMSLLVLWEGA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181466g00005 348 PANTHER ZINC/IRON TRANSPORTER 53 340 - -
Stsc181466g00005 348 NCBIfam ZIP zinc/iron transport family 42 345 IPR004698 GO:0005385|GO:0016020|GO:0071577
Stsc181466g00005 348 Pfam ZIP Zinc transporter 55 342 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181466g00005 Stsc-Chr181466 27626 30449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181466g00005 30 345 Inorganic Solute Cotransporters AT3G12750 50.151 1.79e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181466g00005 K14709 - qsu:111993283 384.8