Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181464g00006 ATGGCTATGCTACAAACCATTGTTACTGTGATCCTTCTCCTTATGCTTCTTCTCATCATCATCTTCCTTTTCTACCTCTTCAAACCATGGCGCTTCTTCTTGCGCTCCCCTTCCCACTCTTCCTTCAAGGTAGGTGTTGGTGATGACCTAGAGAGGCCTCTTGTTCTCGACCAAGGTGCTGCCAACGATGCCAATTTCTCCTCTAATAATATTAATCAGAGCAATGAATTGCCCATAGATTATGATCTGGAAGGTGCTTGTCACCCCAACGAACTTCATTTTCGCTCTCCTGGAGCACTTGGCCTTGCTCGCAAGCCGAGGCTTCCGATTCGCAATGCGCCACCGCAAGGGGATGCTTTGGTTTTAGATGTTATGTCTGCAGAATCTGTTGATGTTGGCCAAACCCTCAAGCTTTCTCCCGCTCTCTTAGCTGAAGCACAAAAGCATCAGCAGCATCTCAATCTCCAGAATGATAGGGTTCAGGACTCTGTGCAGAGAGATATCCTTGGTCAAAGAAGTTGCCTTACTCTGGAGGTTATCAGTGGTCCTTCTCGAGGGATTCGATGTTCTGTACAGTCTATGAATTCTGCTAGTCTTCCCCTCACCCTGGGAAGAGTTCCTCCGAGCGATTTGGTGATAAACGATTCAGAGGTTTCGGGAAAACATGCCTTGATAAAGTGGAATTTGGATAAAATGAAATGGGAGTTGGTGGATATGGGTAGCTTAAATGGAACACTTTTGAATTCTACGCCAATCAACCATCCAGACACTGGAAGCAGGGTTTGGGGCGATCCTATCAATCTTGCTGATGGCGATATCATAACACTTGGATCAATGTCGAAAATAAGTGTTCATGTTACTGCACAAAATCAGCAACACATTCCATTTGGAGTTGGTATGGCATCGGATCCCATGGCTTTGCGTAGAGGAGCAAAGAAGCTTGCTATGGAAGATGTTTGCTATTATCACTGGCCTCTGCCTGGGCTGGATCAGTTTGGGCTATTTGGTATCTGTGATGGCCACGGTGGAGATGGGGCTGCTAAATCTGCAAGCAAACTTTTTCCTGAGATAATTGCTAATATATTATTGGATTCATCAAAAAGGGAAAGGGTTTTATCACTTCATGATGCTTCAGAAATTCTGCGAGATGCATTTTCTCAAACAGAAGCATGCTTGAATAATTACTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCTGATGGTGAAAATTTCTTTGCACAATGTGCAAATGTTGGAGACTCTGCCTGTGTTATGAGTGTTAATGGGAAACAAATCAAGATGTCGGAAGATCACAAGATAACAACTTATTCTGAAAGACAGAGAATTGAAGAGACTGGCGAACCATTGAAAGATGGGGAAACACGTTTATATGGTATTAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCCCGGTTCAGTTCAGAGCCTTATATTAGTCAAGTGGTGCATATTGATCAAGCAAGCCGGGCTTTTGCCGTTCTAGCTAGTGATGGGCTTTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTAGTGCTTCAGATGAGGGAGAGATACTGTACAGAGAGAGAGAATTTGGCAGAAAAGATTGCTAGTTCATTGTTGGGTGAGGCTAAAACACACAGAACAAAGGACAATACCTCTGTAATTTTCTTAGATTTTGATAGCTTCAACAGATTTTCTTGTAAAGTTGAATCCTAG 1743 0.4366 MAMLQTIVTVILLLMLLLIIIFLFYLFKPWRFFLRSPSHSSFKVGVGDDLERPLVLDQGAANDANFSSNNINQSNELPIDYDLEGACHPNELHFRSPGALGLARKPRLPIRNAPPQGDALVLDVMSAESVDVGQTLKLSPALLAEAQKHQQHLNLQNDRVQDSVQRDILGQRSCLTLEVISGPSRGIRCSVQSMNSASLPLTLGRVPPSDLVINDSEVSGKHALIKWNLDKMKWELVDMGSLNGTLLNSTPINHPDTGSRVWGDPINLADGDIITLGSMSKISVHVTAQNQQHIPFGVGMASDPMALRRGAKKLAMEDVCYYHWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIIANILLDSSKRERVLSLHDASEILRDAFSQTEACLNNYYEGCTATVLLVWADGENFFAQCANVGDSACVMSVNGKQIKMSEDHKITTYSERQRIEETGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASRAFAVLASDGLWDVISMKKAIQLVLQMRERYCTERENLAEKIASSLLGEAKTHRTKDNTSVIFLDFDSFNRFSCKVES 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181464g00006 580 SMART FHA_2 200 252 IPR000253 GO:0005515
Stsc181464g00006 580 PANTHER PROTEIN PHOSPHATASE 2C 292 565 IPR015655 GO:0004722|GO:0006470
Stsc181464g00006 580 CDD PP2Cc 309 568 IPR001932 -
Stsc181464g00006 580 CDD FHA_PP2C70-like 175 285 - -
Stsc181464g00006 580 FunFam Protein phosphatase 2C 70 305 575 - -
Stsc181464g00006 580 Pfam Protein phosphatase 2C 314 561 IPR001932 -
Stsc181464g00006 580 Gene3D - 306 576 IPR036457 -
Stsc181464g00006 580 FunFam Protein phosphatase 2C 70 170 304 - -
Stsc181464g00006 580 SUPERFAMILY SMAD/FHA domain 174 280 IPR008984 GO:0005515
Stsc181464g00006 580 Gene3D - 170 305 - -
Stsc181464g00006 580 ProSiteProfiles PPM-type phosphatase domain profile. 297 568 IPR001932 -
Stsc181464g00006 580 ProSitePatterns PPM-type phosphatase domain signature. 334 342 IPR000222 GO:0043169
Stsc181464g00006 580 ProSiteProfiles Forkhead-associated (FHA) domain profile. 201 252 IPR000253 GO:0005515
Stsc181464g00006 580 SMART PP2C_4 291 566 IPR001932 -
Stsc181464g00006 580 Pfam FHA domain 202 277 IPR000253 GO:0005515
Stsc181464g00006 580 SUPERFAMILY PP2C-like 307 570 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181464g00006 Stsc-Chr181464 25696 29679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181464g00006 1 570 PP2C-type Phosphatase Gene Family AT5G19280 55.224 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181464g00006 K01090 - gmx:100170643 826.624