Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181460g00007 ATGTCTTCACCTATACTTCTCCTTTTCTTGTTCCTCTTAAGCCACACCAATTGTTACTCACCTCATGTTAACTACCTCATTGATTGCGGCGCCTCCAACCAAACTCACCTCAACGATGGCAGAACCTTCAAATCCGATCGCCAAACCACTTCCCTCTTATCCACATCAGAATACATCCAAGCTTCAACCGATTCACCAATCACCATAACCATACCACCTTCTGTTCCTCCATCATCGCTTCCATTGTTCCAAACCGCAAGAATCTTCAAAGACGAATCCACATACACCTTCTACATCTCCCGAACCGGCGGCCGAATCTGGATCCGCCTTTACTTCTACGCTCTCCCCCACCCTCCCTATGATCTCACAACCGCTTCCTTCTCTGTCCACACCAACCACTTCGTTCTACTCAGCGAATTCTCTCTCAAAAACAACCACCATCTTGTTTTCAAGGAGTATCTCGTTAGCGTCTTCGACAACAGATTCTCTCTCAAGTTCAAGCCCAAGAAGAACTCATTCGCATTCATCAACGCAATAGAGGTTGTCTCCGCCCCTGACACGCTCATCTCCGACTCCGCCACCGCGGTTTCCCCTCTCGGAGAATTCAAAGGGCTAGTGCAATCTGAGTACCAAGTAATGCACCGCGTCAACGTGGGCGGCGCAATCATAGCCCCTAACAACGACAGCTTATCAAGAACATGGGAGCCTGATGATGCTTACAATGTAAATCCAAATCGTTCAGTAAACGTTGCTGTTCCTTACAAAGCAATCAAATACCCTCAATTCGGTGACGCATCTTTGATTGCTCCTAGCTTCGTATACGCAACTGCAGCGCAGATCAAAGATCATAAAGACATGCAGTTTCAAAGCAAGTTCAATCTAAGTTGGATGATGAACGTGGACAGTAGCTACTCTTACTTGATAAGGTTGCATTTCTGCGACATCGTCAGCAAAACCCTAAACCAATTGGTCTTCAATGTCTACATCAATGGCAGGGTTGGTGTGCCTGATTTGAACCTTTCTTCTCAAACCAAAGATCTAGCCACAGCATTTTACCAAGACTTGGTCCTTAACGCTTCCGCCGTCGAAAACGGCTACATCTTGGTTCAGGTGGAGCCCGGTGATCTCCAGCACGGCACAAGCAACGCGATCTTGAATGGAATCGAGGTGATGAAGATGATCAACTCCGCAAAGAGCTTCGATGGATCGTTCTCCGTGGATGGACATTACAGAGGGGAACATTCGCCACACAAGGGAGCAATGAGGAAGGTTGCTTTTGTTGGATTGGGATTGGCATTTATAAACTTATTATTGCTATTAATAACTTGTGTTGGAATGCGAAAAGGGACTAAAACCTGGCAAGTGTCATCAAGCTTAACTTGGTGGATGATCTTCCTCTTCCATTTAAGATCATATTCAAGGGGTAACCCTCAAAGGAGAGGGTCTAAAAGATTCTTTCATTTCAAGGAATTACAACTCGCCACTAACAACTTCGACGAAAGGAGAGTGATTGGTGTTGGAGGCTTTGGTAAAGTGTATCTAGGAAGATTGAGAGAAGACAACATGAATGTGGCTATAAAGCGAGCTAATGGCGGTTCAGGACAAGGCTTAAACGAATTCAGAACCGAGCTAGACATGCTCTCGAAGCTCCGCCACCGCCACCTTGTGTCCCTAATAGGCTACTGCGACGAGGATTCGGAAATGATCCTGGTTTATGAGTACATGGCTAATGGCTCCTTTCGGTCTCACCTCTACGGTGCTAACCACCTCCGTCCCCTGTCTTGGCAACAGAGGCTTGAAATTTGCATCGGCGCGGCTCGCGGATTGTACTACCTCCACACCGGAGCAGCTCAGAGTGTCATTCACAGGGATGTAAAGACTACAAACATACTGTTAGATGAAAACTACGTGGCGAAGGTTTCGGATTTCGGATTGTCGAAAACACTCCCTAACAAAGCATATGTTAGCACTGCGGTGAAAGGGAGTTTTGGATATCTTGATCCTGAGTATTTCAGGAGGCTGCAATTGACACAGAAATCTGATGTGTATTCCTTTGGTGTGGTGCTTCTTGAGGCTGTTTGTGGAAAGTCTGTTATATGGACTTGTCCAATTTCAATGGAGCAAGTTAGCTTGGTTGATTGGGCAATTGAACAGTGCAAAAGAGGGAGGGTTCATGAGGTAGTTGATCCCTTCATTGTTGAGAGTATAAACCCTGAATCATTGAAGATGTATTTGGGAGCTGCTAAGAAGTGTTTGGAGGATCATGGTGTTGATAGGCCTAACATGGGGGATGTGTTGTGGCATCTGGAATGTGCTTTGCAATTACAAGAAGGTGCATCCCATGTTGATGCACCGGAATATGATATGAGTTGGAAGAATTTAGTTTGGTCTCCACAAGAAGGGCAAACGGGGAATAGTAATGTGATGGATAATGATATTGATAATGCGGCTGATATCACAGATGTTAATGCTGCTTTGTTTTCTCAGATAGCTAACCTTCAAGGGAGGTAA 2511 0.4556 MSSPILLLFLFLLSHTNCYSPHVNYLIDCGASNQTHLNDGRTFKSDRQTTSLLSTSEYIQASTDSPITITIPPSVPPSSLPLFQTARIFKDESTYTFYISRTGGRIWIRLYFYALPHPPYDLTTASFSVHTNHFVLLSEFSLKNNHHLVFKEYLVSVFDNRFSLKFKPKKNSFAFINAIEVVSAPDTLISDSATAVSPLGEFKGLVQSEYQVMHRVNVGGAIIAPNNDSLSRTWEPDDAYNVNPNRSVNVAVPYKAIKYPQFGDASLIAPSFVYATAAQIKDHKDMQFQSKFNLSWMMNVDSSYSYLIRLHFCDIVSKTLNQLVFNVYINGRVGVPDLNLSSQTKDLATAFYQDLVLNASAVENGYILVQVEPGDLQHGTSNAILNGIEVMKMINSAKSFDGSFSVDGHYRGEHSPHKGAMRKVAFVGLGLAFINLLLLLITCVGMRKGTKTWQVSSSLTWWMIFLFHLRSYSRGNPQRRGSKRFFHFKELQLATNNFDERRVIGVGGFGKVYLGRLREDNMNVAIKRANGGSGQGLNEFRTELDMLSKLRHRHLVSLIGYCDEDSEMILVYEYMANGSFRSHLYGANHLRPLSWQQRLEICIGAARGLYYLHTGAAQSVIHRDVKTTNILLDENYVAKVSDFGLSKTLPNKAYVSTAVKGSFGYLDPEYFRRLQLTQKSDVYSFGVVLLEAVCGKSVIWTCPISMEQVSLVDWAIEQCKRGRVHEVVDPFIVESINPESLKMYLGAAKKCLEDHGVDRPNMGDVLWHLECALQLQEGASHVDAPEYDMSWKNLVWSPQEGQTGNSNVMDNDIDNAADITDVNAALFSQIANLQGR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181460g00007 836 SMART serkin_6 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181460g00007 836 FunFam Receptor-like protein kinase FERONIA 209 395 - -
Stsc181460g00007 836 Gene3D Transferase(Phosphotransferase) domain 1 575 790 - -
Stsc181460g00007 836 CDD STKc_IRAK 504 770 - -
Stsc181460g00007 836 FunFam receptor-like protein kinase FERONIA 468 574 - -
Stsc181460g00007 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Stsc181460g00007 836 Pfam Malectin-like domain 27 393 IPR024788 -
Stsc181460g00007 836 FunFam Receptor-like protein kinase FERONIA 575 790 - -
Stsc181460g00007 836 PANTHER OS07G0166700 PROTEIN 484 776 IPR045272 GO:0004714|GO:0006468
Stsc181460g00007 836 SUPERFAMILY Protein kinase-like (PK-like) 482 771 IPR011009 -
Stsc181460g00007 836 Gene3D - 208 394 - -
Stsc181460g00007 836 Gene3D - 20 185 - -
Stsc181460g00007 836 FunFam Putative receptor-like protein kinase 24 185 - -
Stsc181460g00007 836 ProSitePatterns Protein kinases ATP-binding region signature. 504 527 IPR017441 GO:0005524
Stsc181460g00007 836 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181460g00007 836 Pfam Protein tyrosine and serine/threonine kinase 501 700 IPR001245 GO:0004672|GO:0006468
Stsc181460g00007 836 Gene3D Phosphorylase Kinase; domain 1 483 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181460g00007 Stsc-Chr181460 44535 47045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181460g00007 12 786 Receptor kinase-like Gene Family AT5G61350 53.144 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc181460g00007 Malectin_like 1.1e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181460g00007 - - gmx:100814982 955.281