Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181459g00014 ATGGACAAAGCGACGTTACTGGGTGAAGTTGTTAAGCAAGTGAAGGAACTGAAGAAGAATGCAGAGGAGGCAAGCAAAGGCTTCCTGATCCCAATGGATTTCGATGAAGTGAAGGTTGAAGCAGCAGCTGGAGAAGGAGATGGATCATCCATGTCTTACAAGGCAACCTTGTGTTGCGAATACCGGCCTGATCTGCTATCTGTTCTAAGACAAACTTTTGATGGCCTTCAACTTCAATTGGTGAGTGTACAAGTATCCACTTTGGGAGACAGAGTCAAGAATGAAGTTGTTTACACTTGTTACTGCAAAGGGGATATGAATAATATGATGATGACTTGTGTTGAGGCATGCCATGTTCTTGCAAGTAATGTTCATCAGGCTCTGTCTTCTCTACTCATCTCACATCCAAGCAACAACACAAGACCTTGCTTTCTTGAAACATTTGCTGCTTCTTCATCCTACAATTAA 468 0.4252 MDKATLLGEVVKQVKELKKNAEEASKGFLIPMDFDEVKVEAAAGEGDGSSMSYKATLCCEYRPDLLSVLRQTFDGLQLQLVSVQVSTLGDRVKNEVVYTCYCKGDMNNMMMTCVEACHVLASNVHQALSSLLISHPSNNTRPCFLETFAASSSYN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181459g00014 155 PANTHER TRANSCRIPTION FACTOR BHLH30 1 135 IPR045847 GO:0003700|GO:0006355
Stsc181459g00014 155 CDD ACT_UUR-ACR-like 56 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181459g00014 Stsc-Chr181459 53585 54672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181459g00014 2 119 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 35.115 6.84e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181459g00014 - - aip:107619956 220.705