Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181458g00009 ATGGGGAAGAGTTACCCAGCAGTAAGTGTGGAGTATCAGAAAGCTATTGACAAGTGCAAGAAGAAGCTTAGGGGACTCATTCAAGAGAAACAGTGTGCTCCCATTATGCTAAGATTAGCATGGCATTCTGCTGGTACCTATGATGTGAAGAGCAAGACAGGTGGACCGTTTGGCACCATAAGGCACCAAGCAGAGCTTTCTCATGAAGCAAATAATGGCCTTGACATTGCTGTTAGGCTTCTTGAACCAATCAAGGAGCAGTTCCCCATCATATCTTATGCTGACTTGTATCAGTTGGCTGGAGTTGTTGCCGTGGAAGTGACCGGAGGACCTGAGATACCGTTCCACCCGGGGCGACCGGACAAAAATGAGCCGCCTCCAGAAGGTCGTTTACCAGATGCCAAAAGAGGTTCTGACCATTTGAGGGATGTATTTGGCCATATGGGTTTGTCTGATAAGGATATAGTTGCCTTATCTGGTGGTCACACACTGGGACGGTGCCACAAGGAGCGCTCTGGATTTGAGGGAGCATGGACTCCCAACCCTCTTGTTTTTGACAACTCTTACTTCAAGGAACTTCTAAGTGGAGAAAAAGATGGTTTGATCCAACTTCCTTCAGACAAGGCTCTTCTGAGTGATCCTGTCTTCCGTCCTCTTGTTGAAAAATATGCTGCTGATGAGGATGCCTTCTTTGCTGATTACGCCGAAGCTCACTTGAAGCTCTCAGAACTTGGATTCGCAGATGCTAACTAA 753 0.4714 MGKSYPAVSVEYQKAIDKCKKKLRGLIQEKQCAPIMLRLAWHSAGTYDVKSKTGGPFGTIRHQAELSHEANNGLDIAVRLLEPIKEQFPIISYADLYQLAGVVAVEVTGGPEIPFHPGRPDKNEPPPEGRLPDAKRGSDHLRDVFGHMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLVFDNSYFKELLSGEKDGLIQLPSDKALLSDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFADAN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181458g00009 250 Pfam Peroxidase 21 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 Gene3D Peroxidase, domain 2 132 238 - -
Stsc181458g00009 250 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Haem peroxidase superfamily signature 91 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Haem peroxidase superfamily signature 154 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Stsc181458g00009 250 FunFam L-ascorbate peroxidase, cytosolic 132 238 - -
Stsc181458g00009 250 Gene3D - 20 245 - -
Stsc181458g00009 250 MobiDBLite consensus disorder prediction 117 138 - -
Stsc181458g00009 250 MobiDBLite consensus disorder prediction 111 138 - -
Stsc181458g00009 250 ProSiteProfiles Plant heme peroxidase family profile. 74 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 FunFam Cytosolic ascorbate peroxidase 19 138 - -
Stsc181458g00009 250 ProSitePatterns Peroxidases proximal heme-ligand signature. 154 164 IPR019793 -
Stsc181458g00009 250 PRINTS Plant ascorbate peroxidase signature 222 246 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Plant ascorbate peroxidase signature 51 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Plant ascorbate peroxidase signature 65 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Plant ascorbate peroxidase signature 109 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Plant ascorbate peroxidase signature 12 32 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Plant ascorbate peroxidase signature 130 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Plant ascorbate peroxidase signature 90 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Plant ascorbate peroxidase signature 148 169 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 PRINTS Plant ascorbate peroxidase signature 170 194 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 SUPERFAMILY Heme-dependent peroxidases 17 248 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc181458g00009 250 CDD ascorbate_peroxidase 5 249 - -
Stsc181458g00009 250 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 10 245 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181458g00009 Stsc-Chr181458 53046 57468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181458g00009 12 245 Peroxidase AT4G17690 31.071 4.15e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181458g00009 K00434 - zju:107432898 466.077