Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181457g00007 ATGCCTTCTTCATCCACCACCATAATTTCAAAATGCACAATCTACCCAGACCAAAAATCCACCCTCAAACCCCTACACCTCTCTGTCTCTGACCTTCCCATGCTTTCTTGCCACTACATCCAAAAGGGAGTCCTCTTTTCTTCTCCCCCTCAACCCTTTCAAGACCTCATCGATTCCCTCAAACTCTCTCTCTCCTCCACTCTCTCTCTCTTCCCCGCCCTCGCCGGCCGATTCTCCACCGACTCCTCTGGCCATGTCAACATCGTTTGTAACGACGCTGGAGTTGATTTCATTCACGCCAATGCCAAGCATCTCACCCTCGCCACCCTCCTCTCCCCGCCGGCCAATTTCCCCGATGTGCATCCTTCTTTCAAGGAGTTCTTTGCTTATGATATGACAATTTCTTATTCCGGCCACAACCTCCCCCTCGCCGCCGTCCAAGTCACCGAGCTCGCCGACGGTGTCTTCATCGGTATCACCGCCAACCACGCCGTCACCGACGGTACCTCCTTCTGGCACTTCTTCAACACATTCGCCGCTGTCACCAAGGCCGCCGGCTCCGGCGCCAAAAAGAAGATTGCTCGTTACCCGGACTTCACTCGCGACACCGTCTTCAACTCCTCCGTCGTCCTCCCCGTCCCCGCCGGCGGTCCCACCGTGACGTTCGACGCCGACGAGCCTCTTCGGGAGCGAGTCTTTCACTTCTCCAGGGAAGGCATCCAGCGTCTGAAAAAACAAGCTAACAGTAACCGCCACAAAAACAACGACGGTTGGAAAACCGTTGGAGTTAACGGTAACGGAAACTGTAACGGTAACGGAAACGGAACTGTTAATGTGAGGAACAACGACGAGATCTCGTCGTTTCAATCTTTATCTGCCCAGCTTTGGCGATCCGTGACACGTGCCAGGAAATTAGACGCTTCCAAAACGTCGACGTTTCGGATGGCCGTTAATTGCCGTCACCGTTTGGAGCCAAAGATGGATCCGTTTTACTTTGGGAACGCGATTCAGAGCATCCCAACGGTCGCAACGGTTGGGGATATTGTTTCCAAGGACCTCGGCTTCTGCGCCGAACTGCTGCACCATAACGTCGTTGCGCACGACGATGCTACGGTGCGGCGCGGCGTAGAAGACTGGGAGAAGGCTCCTAGACTGTTTCCTCTCGGAAACTTCGACGGAGCCATGATTACTATGGGGAGTTCGCCGCGTTTTCCGATGTACGACAATGATTTCGGGTGGGGAAAGCCGTTGGCGATTCGGAGCGGGAAGGCGAACAAGTTCGACGGTAAGATCTCGGCGTTTCCCGGTAGGGAAGGAAACGGCAGCGTTGATCTTGAAGTCGTTTTGGCACCAGAAACGATGGCGGGACTCGAAAACGACATGGAGTTTATGCAGTACGTGACCTCATTCGAATAA 1416 0.541 MPSSSTTIISKCTIYPDQKSTLKPLHLSVSDLPMLSCHYIQKGVLFSSPPQPFQDLIDSLKLSLSSTLSLFPALAGRFSTDSSGHVNIVCNDAGVDFIHANAKHLTLATLLSPPANFPDVHPSFKEFFAYDMTISYSGHNLPLAAVQVTELADGVFIGITANHAVTDGTSFWHFFNTFAAVTKAAGSGAKKKIARYPDFTRDTVFNSSVVLPVPAGGPTVTFDADEPLRERVFHFSREGIQRLKKQANSNRHKNNDGWKTVGVNGNGNCNGNGNGTVNVRNNDEISSFQSLSAQLWRSVTRARKLDASKTSTFRMAVNCRHRLEPKMDPFYFGNAIQSIPTVATVGDIVSKDLGFCAELLHHNVVAHDDATVRRGVEDWEKAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGKPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVTSFE 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181457g00007 471 Gene3D - 216 460 IPR023213 -
Stsc181457g00007 471 Gene3D - 6 210 IPR023213 -
Stsc181457g00007 471 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 465 - -
Stsc181457g00007 471 Pfam Transferase family 6 464 - -
Stsc181457g00007 471 SUPERFAMILY CoA-dependent acyltransferases 36 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181457g00007 Stsc-Chr181457 54689 56634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181457g00007 60 459 Monolignol Biosynthesis Gene Families AT5G48930 26.634 2.65e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181457g00007 - - gmx:100780358 704.131